RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 AGERQ15109 404 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 DHCR24Q15392 516 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 DUOXA2Q1HG44 320 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 L1TD1Q5T7N2 865 aaKnown RBP8.25□□□□□ -1.09
LSM5-202ENST00000409292 RRAGBQ5VZM2 374 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 SLC39A4Q6P5W5 647 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 LRSAM1Q6UWE0 723 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 DYMQ7RTS9 669 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 SFR1Q86XK3 245 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 RGL4Q8IZJ4 473 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 GPD1LQ8N335 351 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 TMEM130Q8N3G9 435 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 ALLCQ8N6M5 410 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 C1orf127Q8N9H9 656 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 OLIG1Q8TAK6 271 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 MYLPFQ96A32 169 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 SAAL1Q96ER3 474 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 CDK15Q96Q40 435 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 ELOVL4Q9GZR5 314 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 DNAI2Q9GZS0 605 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 LINC00597Q9H2U6 94 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 UPF2Q9HAU5 1272 aaKnown RBP8.25□□□□□ -1.09
LSM5-202ENST00000409292 CFAP97Q9P2B7 532 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 DEC1Q9P2X7 70 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 SMC3Q9UQE7 1217 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 APOBEC2Q9Y235 224 aaKnown RBP8.25□□□□□ -1.09
LSM5-202ENST00000409292 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.25□□□□□ -1.09
LSM5-202ENST00000409292 CPQQ9Y646 472 aa8.25□□□□□ -1.09
LSM5-202ENST00000409292 ABCA7Q8IZY2 2146 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 SCN1AP35498 2009 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 NUP205Q92621 2012 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 E2F8A0AVK6 867 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 C2orf78A6NCI8 922 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 GABRDO14764 452 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 TADA3O75528 432 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 CYP17A1P05093 508 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 FAM163BP0C2L3 166 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 YWHAQP27348 245 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 GNL1P36915 607 aaPredicted RBP8.24□□□□□ -1.09
LSM5-202ENST00000409292 OPRD1P41143 372 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 NOP14P78316 857 aaKnown RBP8.24□□□□□ -1.09
LSM5-202ENST00000409292 KDSRQ06136 332 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 SEMA3BQ13214 749 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 TRPC3Q13507 836 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 RABEP1Q15276 862 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 WDR45BQ5MNZ6 344 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 LARP1BQ659C4 914 aaKnown RBP8.24□□□□□ -1.09
LSM5-202ENST00000409292 NAIF1Q69YI7 327 aaPredicted RBP8.24□□□□□ -1.09
LSM5-202ENST00000409292 FAM171BQ6P995 826 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 CCDC73Q6ZRK6 1079 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 CCDC65Q8IXS2 484 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 ADGRG2Q8IZP9 1017 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 ZNF513Q8N8E2 541 aaPredicted RBP8.24□□□□□ -1.09
LSM5-202ENST00000409292 ENGASEQ8NFI3 743 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 OR6B3Q8NGW1 331 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 SCFD1Q8WVM8 642 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 RLN3Q8WXF3 142 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 OVCA2Q8WZ82 227 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 GATA6Q92908 595 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 FOXJ1Q92949 421 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 C8orf48Q96LL4 319 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 XPO6Q96QU8 1125 aaKnown RBP8.24□□□□□ -1.09
LSM5-202ENST00000409292 FNBP1Q96RU3 617 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 SLC22A12Q96S37 553 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 ZDHHC5Q9C0B5 715 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.24□□□□□ -1.09
LSM5-202ENST00000409292 BLOC1S4Q9NUP1 217 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 SMPD4Q9NXE4 827 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 PPP4R2Q9NY27 417 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 LSM7Q9UK45 103 aaKnown RBP8.24□□□□□ -1.09
LSM5-202ENST00000409292 RALYQ9UKM9 306 aaKnown RBP8.24□□□□□ -1.09
LSM5-202ENST00000409292 CHD6Q8TD26 2715 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 CEP295Q9C0D2 2601 aa8.24□□□□□ -1.09
LSM5-202ENST00000409292 FRYLO94915 3013 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 SPAARA0A1B0GVQ0 90 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 A0A1W2PQD8 194 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 ZNF840PA6NDX5 716 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 TISP43B9A030 160 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 SGK1O00141 431 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 PDGFRBP09619 1106 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 HOXB2P14652 356 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 PDCP20941 246 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 WARSP23381 471 aaKnown RBP8.23□□□□□ -1.09
LSM5-202ENST00000409292 GJB2P29033 226 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 NTSR1P30989 418 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 PTGER3P43115 390 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 PSMC1P62191 440 aaKnown RBP8.23□□□□□ -1.09
LSM5-202ENST00000409292 RING1Q06587 406 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 ZNF33AQ06730 810 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 IFRD2Q12894 506 aaPredicted RBP8.23□□□□□ -1.09
LSM5-202ENST00000409292 TAF10Q12962 218 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 STARD3Q14849 445 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 SOWAHAQ2M3V2 549 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 ANO4Q32M45 955 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 C10orf76Q5T2E6 689 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 HECTD3Q5T447 861 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 GRAMD4Q6IC98 578 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 CRELD2Q6UXH1 353 aaPredicted RBP8.23□□□□□ -1.09
LSM5-202ENST00000409292 CHPFQ8IZ52 775 aa8.23□□□□□ -1.09
LSM5-202ENST00000409292 NUP93Q8N1F7 819 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms