RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 NAT1P18440 290 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 NR2F2P24468 414 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 WEE1P30291 646 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 CTHP32929 405 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ACTN2P35609 894 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 MAGEA11P43364 429 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 RPS9P46781 194 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 TMED1Q13445 227 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 PON2Q15165 354 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ZACNQ401N2 412 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ZCWPW2Q504Y3 356 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 CCDC181Q5TID7 509 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 C4orf50Q6ZRC1 276 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 PAQR9Q6ZVX9 377 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 SV2AQ7L0J3 742 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 CACTIN-AS1Q8N1I8 211 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 CELF5Q8N6W0 485 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ARL14EPQ8N8R7 260 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 B3GALNT2Q8NCR0 500 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 CCDC112Q8NEF3 446 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ENGASEQ8NFI3 743 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 NEK11Q8NG66 645 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 MRPS31Q92665 395 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 E2F7Q96AV8 911 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 BAG1Q99933 345 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 FAM83CQ9BQN1 747 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 MMRN2Q9H8L6 949 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 VRTNQ9H8Y1 702 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 APOBEC3GQ9HC16 384 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 GKN1Q9NS71 199 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 TDP1Q9NUW8 608 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 POLR3BQ9NW08 1133 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 TRAF3IP3Q9Y228 551 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ATP6V1DQ9Y5K8 247 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 CACNA1AO00555 2505 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 SCAMP3O14828 347 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 CALUO43852 315 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 PECAM1P16284 738 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ATICP31939 592 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ASPAP45381 313 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 GCLMP48507 274 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 PPP3CAQ08209 521 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 DMWDQ09019 674 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 IFRD2Q12894 506 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ZNF77Q15935 545 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ARHGAP29Q52LW3 1261 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 VSTM1Q6UX27 236 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 TMEM92Q6UXU6 159 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 DENND5BQ6ZUT9 1274 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 ADSSL1Q8N142 457 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 TAS1R2Q8TE23 839 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 SPATA17Q96L03 361 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 TWNKQ96RR1 684 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 KCNK16Q96T55 309 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 NELL2Q99435 816 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 CHRDQ9H2X0 955 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 FBRSL1Q9HCM7 1045 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 PRMT8Q9NR22 394 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 OBP2AQ9NY56 170 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 GCNT4Q9P109 453 aa10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 MRPS17Q9Y2R5 130 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-202ENST00000409020 DENND4CQ5VZ89 1909 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 BEST1O76090 585 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 ASS1P00966 412 aaKnown RBP10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 HLA-DRAP01903 254 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 CKMP06732 381 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 CCDC130P13994 396 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 DDX6P26196 483 aaKnown RBP eCLIP10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 PGFP49763 221 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 PMS1P54277 932 aaKnown RBP10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 KCNB1Q14721 858 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 ZNF667Q5HYK9 610 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 PKN3Q6P5Z2 889 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 ACOT1Q86TX2 421 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 GUF1Q8N442 669 aaKnown RBP10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 DCLK2Q8N568 766 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 C12orf29Q8N999 325 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 SCAMP5Q8TAC9 235 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 RMDN2Q96LZ7 410 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 PLEKHG4BQ96PX9 1271 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 UBXN6Q9BZV1 441 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 RNF38Q9H0F5 515 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 HOMER3Q9NSC5 361 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 WNT6Q9Y6F9 365 aa10.24□□□□□ -0.77
NIF3L1-202ENST00000409020 GREB1Q4ZG55 1949 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 ZFHX4Q86UP3 3567 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 TRAV19A0A0A6YYK7 116 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 ANTXRLA6NF34 631 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 PIK3CAP42336 1068 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 VAMP7P51809 220 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 MNAT1P51948 309 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 NDST1P52848 882 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 TAF10Q12962 218 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 CCINQ13939 588 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 MTF1Q14872 753 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 MAPRE1Q15691 268 aaKnown RBP10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 ITPRIPL2Q3MIP1 535 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 HHATQ5VTY9 493 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 FAM35AQ86V20 835 aa10.23□□□□□ -0.77
NIF3L1-202ENST00000409020 FAM186BQ8IYM0 893 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms