RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 GATA6Q92908 595 aa22.4■■□□□ 1.18
RHBDD3-202ENST00000406335 SH3BP1Q9Y3L3 701 aa22.4■■□□□ 1.18
RHBDD3-202ENST00000406335 NEUROG3Q9Y4Z2 214 aa22.4■■□□□ 1.18
RHBDD3-202ENST00000406335 ITPKAP23677 461 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 NOP14P78316 857 aaKnown RBP22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 SNRNP35Q16560 246 aaKnown RBP22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 KNOP1Q1ED39 458 aaKnown RBP22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 DUOXA1Q1HG43 343 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 SPDYCQ5MJ68 293 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 SLC23A3Q6PIS1 610 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 TRMT11Q7Z4G4 463 aaKnown RBP22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 C12orf40Q86WS4 652 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 KIAA1958Q8N8K9 716 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 C8orf48Q96LL4 319 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 NACA2Q9H009 215 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 FSCN3Q9NQT6 498 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 MBD1Q9UIS9 605 aaPredicted RBP22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 SLC6A14Q9UN76 642 aa22.39■■□□□ 1.17
RHBDD3-202ENST00000406335 ANAPC1Q9H1A4 1944 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 OPHN1O60890 802 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 TNNI1P19237 187 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 TNNC1P63316 161 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 ANO4Q32M45 955 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 LY6G5CQ5SRR4 150 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 SLC36A4Q6YBV0 504 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 XXYLT1Q8NBI6 393 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 MRPL45Q9BRJ2 306 aaKnown RBP22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 TTLL2Q9BWV7 592 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 TMEM121BQ9BXQ6 578 aaPredicted RBP22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 KIAA1586Q9HCI6 787 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 PILRBQ9UKJ0 227 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 SPAG17Q6Q759 2223 aa22.38■■□□□ 1.17
RHBDD3-202ENST00000406335 RPN1P04843 607 aaKnown RBP22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 DLATP10515 647 aaKnown RBP22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 PTPN1P18031 435 aaKnown RBP22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 YWHAQP27348 245 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 SNRPFP62306 86 aaKnown RBP22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 NUCB2P80303 420 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 CYP24A1Q07973 514 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 MESP2Q0VG99 397 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 MAP7D1Q3KQU3 841 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 SDE2Q6IQ49 451 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 KRBA2Q6ZNG9 492 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 C12orf56Q8IXR9 622 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 ZNF513Q8N8E2 541 aaPredicted RBP22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 FBXO32Q969P5 355 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 DEC1Q9P2X7 70 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 KLK13Q9UKR3 277 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 LHX6Q9UPM6 363 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 MSRB2Q9Y3D2 182 aa22.37■■□□□ 1.17
RHBDD3-202ENST00000406335 A8MXQ7 604 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 H0Y626 953 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 ZNF202O95125 648 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 TRIM16O95361 564 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 OAS1P00973 400 aaKnown RBP22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 HOXB3P14651 431 aaPredicted RBP22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 WASP42768 502 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 KIR2DL1P43626 348 aaPredicted RBP22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 TRAPPC11Q7Z392 1133 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 RABEPKQ7Z6M1 372 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 WDR49Q8IV35 697 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 NUP93Q8N1F7 819 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 PDZD8Q8NEN9 1154 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 MED10Q9BTT4 135 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 ELOVL4Q9GZR5 314 aa22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 CHORDC1Q9UHD1 332 aaPredicted RBP22.36■■□□□ 1.17
RHBDD3-202ENST00000406335 A0A0A0MRY4 1105 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 E2F8A0AVK6 867 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 ADAM23O75077 832 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 OLFM2O95897 454 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 MYL1P05976 194 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 RING1Q06587 406 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 DPYDQ12882 1025 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 SEMA3BQ13214 749 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 TRPC3Q13507 836 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 PSMD6Q15008 389 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 ACAP1Q15027 740 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 WDR72Q3MJ13 1102 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 C10orf76Q5T2E6 689 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 LRSAM1Q6UWE0 723 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 CCDC127Q96BQ5 260 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 CGRRF1Q99675 332 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 GZF1Q9H116 711 aaPredicted RBP22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 KCTD10Q9H3F6 313 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 CGNQ9P2M7 1197 aaKnown RBP22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 PCDHB9Q9Y5E1 797 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 EML5Q05BV3 1969 aa22.35■■□□□ 1.17
RHBDD3-202ENST00000406335 CACNA1GO43497 2377 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 CLDN5O00501 218 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 RTN3O95197 1032 aaPredicted RBP22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 SYPP08247 313 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 SERPINF2P08697 491 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 IRF1P10914 325 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 HOXB2P14652 356 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 HOXD12P35452 270 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 ZNF33AQ06730 810 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 HECTD3Q5T447 861 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 LIMS2Q7Z4I7 341 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 RGL4Q8IZJ4 473 aa22.34■■□□□ 1.17
RHBDD3-202ENST00000406335 CHCHD4Q8N4Q1 142 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms