RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 MAGEA11P43364 429 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 CSNK1EP49674 416 aaKnown RBP16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 CLDN6P56747 220 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 TFAMQ00059 246 aaKnown RBP16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 CYP27A1Q02318 531 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 CCDC173Q0VFZ6 552 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 SF3A1Q15459 793 aaKnown RBP16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 ETFBKMTQ8IXQ9 262 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 ADGRF2Q8IZF7 708 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 TMEM86AQ8N2M4 240 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 MYCT1Q8N699 235 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 MYLPFQ96A32 169 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 SPATA17Q96L03 361 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 WSB2Q9NYS7 404 aaPredicted RBP16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 EHD2Q9NZN4 543 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 GMIPQ9P107 970 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 FTSJ1Q9UET6 329 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 SNX9Q9Y5X1 595 aa16.21■□□□□ 0.19
SYNGR1-205ENST00000406293 ATP2C2O75185 946 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 PIGRP01833 764 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 ITGB3P05106 788 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 GRK6P43250 576 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 LHX1P48742 406 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 PSMC1P62191 440 aaKnown RBP16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 DBX2Q6ZNG2 339 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 C4orf32Q8N8J7 132 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 IGSF22Q8N9C0 903 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 SYT2Q8N9I0 419 aaPredicted RBP16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 TMX3Q96JJ7 454 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 PKMYT1Q99640 499 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 ZHX3Q9H4I2 956 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 SPHK2Q9NRA0 654 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 AGO2Q9UKV8 859 aaKnown RBP16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 STARD13Q9Y3M8 1113 aa16.2■□□□□ 0.18
SYNGR1-205ENST00000406293 KNTC1P50748 2209 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 MUC22E2RYF6 1773 aaPredicted RBP16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 E2F8A0AVK6 867 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 ANKRD63C9JTQ0 380 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 KCNK3O14649 394 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 HOXC11O43248 304 aaPredicted RBP16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 FAM13AO94988 1023 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 KRT19P08727 400 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 IRF1P10914 325 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 PPP3CCP48454 512 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 HMGN5P82970 282 aaKnown RBP16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 TAF10Q12962 218 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 STARD3Q14849 445 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 PTPRNQ16849 979 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 KIF19Q2TAC6 998 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 TDRD10Q5VZ19 366 aaKnown RBP16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 SLC39A4Q6P5W5 647 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 PCSK4Q6UW60 755 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 TMEM25Q86YD3 366 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 CADM4Q8NFZ8 388 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 OTUB2Q96DC9 234 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 CDK5RAP3Q96JB5 506 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 SLITRK1Q96PX8 696 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 GABRG3Q99928 467 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 SYT15Q9BQS2 421 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 SNX11Q9Y5W9 270 aa16.19■□□□□ 0.18
SYNGR1-205ENST00000406293 METTL12A8MUP2 240 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 WASH3PC4AMC7 463 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 ERVH48-1M5A8F1 160 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 OAS1P00973 400 aaKnown RBP16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 PLA2G4BP0C869 781 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 PLCG1P19174 1290 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 IL9RQ01113 521 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 DHX8Q14562 1220 aaKnown RBP16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 TEAD4Q15561 434 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 INAVAQ3KP66 663 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 VSTM1Q6UX27 236 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 BBS7Q8IWZ6 715 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 XPO6Q96QU8 1125 aaKnown RBP16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 CD248Q9HCU0 757 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 R3HCC1Q9Y3T6 440 aaKnown RBP16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 NFE2L3Q9Y4A8 694 aa16.18■□□□□ 0.18
SYNGR1-205ENST00000406293 TISP43B9A030 160 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 PRRT4C9JH25 899 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 NEDD8-MDP1E9PL57 170 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 TRIM66O15016 1216 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 IL18RAPO95256 599 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 WISP1O95388 367 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 OLFM2O95897 454 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 PDGFRBP09619 1106 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 ACADMP11310 421 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 OXTRP30559 389 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 CCT8P50990 548 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 TARDBPQ13148 414 aaKnown RBP eCLIP16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 SLFN12LQ6IEE8 588 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 FAM171BQ6P995 826 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 DTHD1Q6ZMT9 781 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 FAM124AQ86V42 546 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 CACUL1Q86Y37 369 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 FMNL3Q8IVF7 1028 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 CSGALNACT2Q8N6G5 542 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 FGF11Q92914 225 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 C8orf76Q96K31 380 aa16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 MMTAG2Q9BU76 263 aaKnown RBP16.17■□□□□ 0.18
SYNGR1-205ENST00000406293 TTLL2Q9BWV7 592 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms