RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 LBX2Q6XYB7 198 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 BNC2Q6ZN30 1099 aaPredicted RBP6.07□□□□□ -1.44
HDAC9-203ENST00000406072 ILDR2Q71H61 639 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF354CQ86Y25 554 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 SIAH1Q8IUQ4 282 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 MAPKAPK5Q8IW41 473 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 SLC30A5Q8TAD4 765 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 DIS3LQ8TF46 1054 aaKnown RBP6.07□□□□□ -1.44
HDAC9-203ENST00000406072 SCFD2Q8WU76 684 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF317Q96PQ6 595 aaPredicted RBP6.07□□□□□ -1.44
HDAC9-203ENST00000406072 CEP44Q9C0F1 390 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 KLHL11Q9NVR0 708 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 SEPT10Q9P0V9 454 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 COPG2Q9UBF2 871 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 PACSIN3Q9UKS6 424 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 USP20Q9Y2K6 914 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 SLC45A1Q9Y2W3 748 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 PCDHB4Q9Y5E5 795 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 PCDHGA3Q9Y5H0 932 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 STK24Q9Y6E0 443 aa6.07□□□□□ -1.44
HDAC9-203ENST00000406072 PDZK1P1A8MUH7 402 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 C2CD2LO14523 706 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 RAD51BO15315 384 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF24P17028 368 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 POLR2BP30876 1174 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 WASHC5Q12768 1159 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 SLC12A1Q13621 1099 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 PTK2BQ14289 1009 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 KRT72Q14CN4 511 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 TMEM214Q6NUQ4 689 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 CCDC81Q6ZN84 652 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 FRMD5Q7Z6J6 570 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 SLFN12Q8IYM2 578 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 EFCAB3Q8N7B9 438 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 USP13Q92995 863 aaPredicted RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 COA7Q96BR5 231 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 TLCD1Q96CP7 247 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 TUBGCP3Q96CW5 907 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 CLPTM1LQ96KA5 538 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 CADM1Q9BY67 442 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 KLC2Q9H0B6 622 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 INTS2Q9H0H0 1204 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 FAM237BA0A1B0GVD1 139 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 DDTLA6NHG4 134 aaPredicted RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 FOXO6A8MYZ6 492 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 PIK3CDO00329 1044 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 EDF1O60869 148 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 SPAG6O75602 509 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 ZBED1O96006 694 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 ENO2P09104 434 aaPredicted RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF12P17014 697 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 CDC16Q13042 620 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 PDIA5Q14554 519 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 PDK4Q16654 411 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 NAALADL2Q58DX5 795 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 PDXDC2PQ6P474 469 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 OTOAQ7RTW8 1153 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 BNIPLQ7Z465 357 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 NT5DC3Q86UY8 548 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 DNAAF3Q8N9W5 541 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 SMYD1Q8NB12 490 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 RSPH1Q8WYR4 309 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 LPAR1Q92633 364 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 MBOAT7Q96N66 472 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 DUSP9Q99956 384 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 REXO4Q9GZR2 422 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 SEMA6AQ9H2E6 1030 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 SEMA6BQ9H3T3 888 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 POLR1BQ9H9Y6 1135 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 NINJ2Q9NZG7 142 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 CROTQ9UKG9 612 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 ADAMTS5Q9UNA0 930 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 CHKBQ9Y259 395 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 IPPQ9Y573 584 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 PCDHGA4Q9Y5G9 962 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 SAC3D1A6NKF1 404 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 CENPXA8MT69 81 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF263O14978 683 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 EPHB6O15197 1021 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 CLOCKO15516 846 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 GJB6O95452 261 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 ATXN8OSP0DMR3 200 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 THRAP10827 490 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 CREB1P16220 341 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 YBX3P16989 372 aaKnown RBP eCLIP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 EIF2AK2P19525 551 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 GRK2P25098 689 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 IFNA8P32881 189 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 IREB2P48200 963 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 GMPSP49915 693 aaPredicted RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 TUBP50607 506 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 OAZ1P54368 228 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 TPTEP56180 551 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 RAB14P61106 215 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 FKBP1BP68106 108 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 ZNF543Q08ER8 600 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 NFIAQ12857 509 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 LSAMPQ13449 338 aa6.06□□□□□ -1.44
HDAC9-203ENST00000406072 KRR1Q13601 381 aaKnown RBP6.06□□□□□ -1.44
HDAC9-203ENST00000406072 MROH9Q5TGP6 573 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms