RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ETV4P43268 484 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 PRKD1Q15139 912 aaPredicted RBP12.47□□□□□ -0.41
RBM39-206ENST00000403542 CA9Q16790 459 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 WASHC2DQ5SRD0 308 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 CASC4Q6P4E1 433 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 NCAPG2Q86XI2 1143 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 TEX9Q8N6V9 391 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 POU5F2Q8N7G0 328 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 AGBL3Q8NEM8 1001 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 CFAP61Q8NHU2 1237 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 PPP1R13LQ8WUF5 828 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 RXFP2Q8WXD0 754 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 ELOVL4Q9GZR5 314 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 MIS12Q9H081 205 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 CORO1CQ9ULV4 474 aaPredicted RBP12.47□□□□□ -0.41
RBM39-206ENST00000403542 LYPLA1O75608 230 aaPredicted RBP12.47□□□□□ -0.41
RBM39-206ENST00000403542 TRUB2O95900 331 aaKnown RBP12.47□□□□□ -0.41
RBM39-206ENST00000403542 NEK3P51956 506 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 KLC1Q07866 573 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 PEX6Q13608 980 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 KBTBD2Q8IY47 623 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 RBM15BQ8NDT2 890 aaKnown RBP12.47□□□□□ -0.41
RBM39-206ENST00000403542 SLC44A1Q8WWI5 657 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 COPS5Q92905 334 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 CPB2Q96IY4 423 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 ACSS2Q9NR19 701 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 STOML1Q9UBI4 398 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 SORBS2O94875 1100 aaKnown RBP12.46□□□□□ -0.41
RBM39-206ENST00000403542 IQCF3P0C7M6 154 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 CSH1P0DML2 217 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 CSH2P0DML3 217 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 TFE3P19532 575 aaPredicted RBP12.46□□□□□ -0.41
RBM39-206ENST00000403542 MAP3K10Q02779 954 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 HSF5Q4G112 596 aaPredicted RBP12.46□□□□□ -0.41
RBM39-206ENST00000403542 POLNQ7Z5Q5 900 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 NDUFAF2Q8N183 169 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 SKA1Q96BD8 255 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 CCDC124Q96CT7 223 aaKnown RBP12.46□□□□□ -0.41
RBM39-206ENST00000403542 ANKRD36BP1Q96IX9 119 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 DHRS4Q9BTZ2 278 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 APOL6Q9BWW8 343 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 B3GNT5Q9BYG0 378 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 NRBP2Q9NSY0 501 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 FAM49BQ9NUQ9 324 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 SIX4Q9UIU6 781 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 STRIP2Q9ULQ0 834 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 GINS2Q9Y248 185 aa12.46□□□□□ -0.41
RBM39-206ENST00000403542 BPTFQ12830 3046 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 I3L4J1 428 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 FARP2O94887 1054 aaPredicted RBP12.46□□□□□ -0.42
RBM39-206ENST00000403542 ATG7O95352 703 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 PSMG1O95456 288 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 CCNG1P51959 295 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 SLC18A1P54219 525 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 YWHAZP63104 245 aaKnown RBP12.46□□□□□ -0.42
RBM39-206ENST00000403542 AMHR2Q16671 573 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 MAP1SQ66K74 1059 aaPredicted RBP12.46□□□□□ -0.42
RBM39-206ENST00000403542 CDCA2Q69YH5 1023 aaPredicted RBP12.46□□□□□ -0.42
RBM39-206ENST00000403542 LRRC74BQ6ZQY2 392 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 NUDCD3Q8IVD9 361 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 SCUBE3Q8IX30 993 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 C1orf127Q8N9H9 656 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 TTC13Q8NBP0 860 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 SLC4A11Q8NBS3 891 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 AGR3Q8TD06 166 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.42
RBM39-206ENST00000403542 FBXO41Q8TF61 875 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 ATXN7L3BQ96GX2 97 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 ZNF333Q96JL9 665 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 ZCWPW1Q9H0M4 648 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 SAR1AQ9NR31 198 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 CPSF3Q9UKF6 684 aaKnown RBP12.46□□□□□ -0.42
RBM39-206ENST00000403542 TEX264Q9Y6I9 313 aa12.46□□□□□ -0.42
RBM39-206ENST00000403542 SPDYE16A6NNV3 312 aaPredicted RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 PRPSAP2O60256 369 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 ARIH2O95376 493 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 ZBED1O96006 694 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 VHLP40337 213 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 PHKA2P46019 1235 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 GMPSP49915 693 aaPredicted RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 MRPS5P82675 430 aaKnown RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 PTPN11Q06124 597 aaPredicted RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 TNFAIP1Q13829 316 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 GJC2Q5T442 439 aaPredicted RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 ATF7IP2Q5U623 682 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 RSPH3Q86UC2 560 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 ENDOVQ8N8Q3 282 aaKnown RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 PPP1R14CQ8TAE6 165 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 LNPEPQ9UIQ6 1025 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 ZNF646O15015 1829 aaPredicted RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 A6NHS1 94 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 PRR5-ARHGAP8B1AHC4 643 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 E7ESA3 106 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 NOP56O00567 594 aaKnown RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 TRAFD1O14545 582 aaPredicted RBP12.45□□□□□ -0.42
RBM39-206ENST00000403542 PIGRP01833 764 aa12.45□□□□□ -0.42
RBM39-206ENST00000403542 KCNA3P22001 575 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms