RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 NUP93Q8N1F7 819 aa18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 SYNPOQ8N3V7 929 aa18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 SHC3Q92529 594 aa18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 HEXIM2Q96MH2 286 aaKnown RBP18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 FAM83CQ9BQN1 747 aa18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 LMAN1LQ9HAT1 526 aa18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 NLRC4Q9NPP4 1024 aa18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 KRT82Q9NSB4 513 aa18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 ARHGAP26Q9UNA1 814 aa18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 CNTN6Q9UQ52 1028 aa18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 ZFHX2Q9C0A1 2572 aaPredicted RBP18.89■□□□□ 0.61
THUMPD2-202ENST00000403537 PRR23AA6NEV1 266 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 BEST1O76090 585 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 CD19P15391 556 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 BRD2P25440 801 aaKnown RBP18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 YWHAQP27348 245 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 USP8P40818 1118 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 CCR3P51677 355 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 NRLP54845 237 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 UBASH3AP57075 661 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 POLR2FP61218 127 aaKnown RBP18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 FZD5Q13467 585 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 RUNX3Q13761 415 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 MTF1Q14872 753 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 DRAP1Q14919 205 aaPredicted RBP18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 FILIP1LQ4L180 1135 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 CPA6Q8N4T0 437 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 ATP2A3Q93084 1043 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 ZFYVE19Q96K21 471 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 XPO4Q9C0E2 1151 aaKnown RBP18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 GTSE1Q9NYZ3 720 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 CCL26Q9Y258 94 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 PCDHGA2Q9Y5H1 932 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 GREB1Q4ZG55 1949 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 MYH10P35580 1976 aa18.88■□□□□ 0.61
THUMPD2-202ENST00000403537 ZNF840PA6NDX5 716 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 FOXN3O00409 490 aaPredicted RBP18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 AP1G2O75843 785 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 CHRNB1P11230 501 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 PBX1P40424 430 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 IFNAR2P48551 515 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 CSTF1Q05048 431 aaKnown RBP18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 TAF10Q12962 218 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 USP4Q13107 963 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 NR1H3Q13133 447 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 ZNF77Q15935 545 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 MIA3Q5JRA6 1907 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 ENOSF1Q7L5Y1 443 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 DDX42Q86XP3 938 aaKnown RBP eCLIP18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 ARL14EPQ8N8R7 260 aaPredicted RBP18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 ZMIZ2Q8NF64 920 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 OSCP1Q8WVF1 389 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 CYFIP2Q96F07 1278 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 KCNK16Q96T55 309 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 SMOQ99835 787 aa18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 PRMT8Q9NR22 394 aaPredicted RBP18.87■□□□□ 0.61
THUMPD2-202ENST00000403537 F8VZ95 297 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 CYP26A1O43174 497 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 USP46P62068 366 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 SLC7A9P82251 487 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 TNK2Q07912 1038 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 MTAPQ13126 283 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 GOLGA7BQ2TAP0 167 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 MAML2Q8IZL2 1156 aaPredicted RBP18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 SPEM1Q8N4L4 309 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 NEK11Q8NG66 645 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 SH3RF2Q8TEC5 729 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 ATRIPQ8WXE1 791 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 FBXO32Q969P5 355 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 JAKMIP2Q96AA8 810 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 CYP2S1Q96SQ9 504 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 HNRNPABQ99729 332 aaKnown RBP18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 FBXO44Q9H4M3 255 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 ZSCAN32Q9NX65 697 aa18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 DUS2Q9NX74 493 aaKnown RBP18.86■□□□□ 0.61
THUMPD2-202ENST00000403537 C2orf78A6NCI8 922 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 O00370 1275 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 SLC9A3R1O14745 358 aaPredicted RBP18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 LMNAP02545 664 aaKnown RBP18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 PAEPP09466 180 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 FAM200BP0CF97 657 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 SOX9P48436 509 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 JAM2P57087 298 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 GRSF1Q12849 480 aaKnown RBP eCLIP18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 SGO2Q562F6 1265 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 ARHGAP17Q68EM7 881 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 CLEC20AQ6ZU45 233 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 TTC30AQ86WT1 665 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 SLC22A12Q96S37 553 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 CSNK1G1Q9HCP0 422 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 IL37Q9NZH6 218 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 OBSL1O75147 1896 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 COL4A2P08572 1712 aa18.85■□□□□ 0.61
THUMPD2-202ENST00000403537 TICRRQ7Z2Z1 1910 aa18.84■□□□□ 0.61
THUMPD2-202ENST00000403537 A0A1W2PQC6 194 aa18.84■□□□□ 0.61
THUMPD2-202ENST00000403537 TULP2O00295 520 aa18.84■□□□□ 0.61
THUMPD2-202ENST00000403537 NFATC1O95644 943 aa18.84■□□□□ 0.61
THUMPD2-202ENST00000403537 OLFM2O95897 454 aa18.84■□□□□ 0.61
THUMPD2-202ENST00000403537 ABL1P00519 1130 aa18.84■□□□□ 0.61
THUMPD2-202ENST00000403537 VDRP11473 427 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms