RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 DVL3Q92997 716 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 FKBP10Q96AY3 582 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 MYEOVQ96EZ4 313 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 ZSCAN31Q96LW9 406 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 Q96MF0 132 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 MECRQ9BV79 373 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 VN1R3Q9BXE9 311 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 WDR11Q9BZH6 1224 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 TP63Q9H3D4 680 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 TAF1DQ9H5J8 278 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 PRDM8Q9NQV8 689 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 PNMA2Q9UL42 364 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 DAPP1Q9UN19 280 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 LZTS1Q9Y250 596 aa4.5□□□□□ -1.69
HMGB1P17-201ENST00000403495 OR2W5A6NFC9 320 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 H0Y3Z8 333 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 M0QYT0 321 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 IRAK2O43187 625 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 DHHO43323 396 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 CBFA2T3O75081 653 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 KRT38O76015 456 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 GLP2RO95838 553 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 HSD3B1P14060 373 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 RXRAP19793 462 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 DRD1P21728 446 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 BMPR1AP36894 532 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 ARL4CP56559 192 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 TIRAPP58753 221 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 AP2B1P63010 937 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 ADAM17P78536 824 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 SLC4A8Q2Y0W8 1093 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 ALFQ53S48 1182 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 TMEM196Q5HYL7 178 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 GRHL2Q6ISB3 625 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 VWA1Q6PCB0 445 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 KRT73Q86Y46 540 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 ANKRD18AQ8IVF6 992 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 SYNE4Q8N205 404 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 SLC44A3Q8N4M1 653 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 TTC9BQ8N6N2 239 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 CACTINQ8WUQ7 758 aaKnown RBP4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 C3orf49Q96BT1 292 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 WDYHV1Q96HA8 205 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 PRR11Q96HE9 360 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 FBXL20Q96IG2 436 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 TRAPPC9Q96Q05 1148 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 INO80BQ9C086 356 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 BRD8Q9H0E9 1235 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 ELAC1Q9H777 363 aaKnown RBP4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 HELLSQ9NRZ9 838 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 TBCCD1Q9NVR7 557 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 AURKAIP1Q9NWT8 199 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 ASAP1Q9ULH1 1129 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 REXO2Q9Y3B8 237 aaKnown RBP4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 PCDHB7Q9Y5E2 793 aa4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB1P17-201ENST00000403495 FAM90A18PA6NE21 464 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 FAM90A16PA6NEW6 464 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 FAM90A9PA6NNJ1 464 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 FAM90A5PA8MXJ8 464 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 AP4M1O00189 453 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 YY2O15391 372 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 NCAM2O15394 837 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 CA12O43570 354 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 WDR47O94967 919 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 IL6RP08887 468 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 FAM90A15PP0C7V4 464 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 FAM90A14PP0C7W9 464 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 SRGNP10124 158 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 NR2F6P10588 404 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 ALADP13716 330 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 ADD2P35612 726 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 MAGEA10P43363 369 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 SEC24CP53992 1094 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 PDE1AP54750 535 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 DEUP1Q05D60 604 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 POU5F1BQ06416 359 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 MTAPQ13126 283 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 PDCLQ13371 301 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 BFSP2Q13515 415 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 TAF12Q16514 161 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 CYP1B1Q16678 543 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 MSANTD2Q6P1R3 559 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 KCNV1Q6PIU1 500 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 SYNE3Q6ZMZ3 975 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 RFX8Q6ZV50 586 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 SPRED1Q7Z699 444 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 C2CD5Q86YS7 1000 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 PROKR1Q8TCW9 393 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 ASB12Q8WXK4 309 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 ZDHHC12Q96GR4 267 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 ZNF668Q96K58 619 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 PRR25Q96S07 402 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 WDR24Q96S15 920 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 AIFM2Q9BRQ8 373 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 DPCDQ9BVM2 203 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 VPS16Q9H269 839 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 ZNF703Q9H7S9 590 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 KCTD5Q9NXV2 234 aa4.48□□□□□ -1.69
HMGB1P17-201ENST00000403495 KIF17Q9P2E2 1029 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms