RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 IKBKGQ9Y6K9 419 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 ASB14A6NK59 587 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 MCF2LO15068 1137 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 ADCY3O60266 1144 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 FAM155BO75949 473 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 NPTXRO95502 500 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 INHBAP08476 426 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 PDHA1P08559 390 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 ELK3P41970 407 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 BASP1P80723 227 aaKnown RBP20.65■□□□□ 0.9
CCDC47-202ENST00000403162 CAPSQ13938 189 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 KPNB1Q14974 876 aaKnown RBP20.65■□□□□ 0.9
CCDC47-202ENST00000403162 IRGCQ6NXR0 463 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 RINLQ6ZS11 566 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 CMASQ8NFW8 434 aaPredicted RBP20.65■□□□□ 0.9
CCDC47-202ENST00000403162 MCUR1Q96AQ8 359 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 SYNCQ9H7C4 482 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 TAS2R1Q9NYW7 299 aa20.65■□□□□ 0.9
CCDC47-202ENST00000403162 CLGNO14967 610 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 CD48P09326 243 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 RARBP10826 455 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 BGNP21810 368 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 RFC5P40937 340 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 FAAP100Q0VG06 881 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 DUOXA2Q1HG44 320 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 KBTBD12Q3ZCT8 623 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 SNX30Q5VWJ9 437 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 RFX6Q8HWS3 928 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 VPS52Q8N1B4 723 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 TAB3Q8N5C8 712 aaPredicted RBP20.64■□□□□ 0.89
CCDC47-202ENST00000403162 PRR11Q96HE9 360 aaPredicted RBP20.64■□□□□ 0.89
CCDC47-202ENST00000403162 OXNAD1Q96HP4 312 aaPredicted RBP20.64■□□□□ 0.89
CCDC47-202ENST00000403162 PNPLA8Q9NP80 782 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 LRCH1Q9Y2L9 728 aa20.64■□□□□ 0.89
CCDC47-202ENST00000403162 EIF4E1BA6NMX2 242 aaKnown RBP20.63■□□□□ 0.89
CCDC47-202ENST00000403162 KBTBD13C9JR72 458 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 PSMG1O95456 288 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 WEE2P0C1S8 567 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 RBP3P10745 1247 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 PYGBP11216 843 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 ESRRAP11474 423 aaPredicted RBP20.63■□□□□ 0.89
CCDC47-202ENST00000403162 ASPAP45381 313 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 SP2Q02086 613 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 SLC34A1Q06495 639 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 MORN1Q5T089 497 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 TTC17Q96AE7 1141 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 YIPF3Q9GZM5 350 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 WDR35Q9P2L0 1181 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 TNPO2O14787 897 aaKnown RBP20.63■□□□□ 0.89
CCDC47-202ENST00000403162 TRPA1O75762 1119 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 KRT36O76013 467 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 STIP1P31948 543 aaKnown RBP20.63■□□□□ 0.89
CCDC47-202ENST00000403162 PEX19P40855 299 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 SERPINB4P48594 390 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 SATB1Q01826 763 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 MTM1Q13496 603 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 TRPC3Q13507 836 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 KCNJ11Q14654 390 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 SURF1Q15526 300 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 ARMCX2Q7L311 632 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 KCTD6Q8NC69 237 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 STX18Q9P2W9 335 aaKnown RBP20.63■□□□□ 0.89
CCDC47-202ENST00000403162 CYTH4Q9UIA0 394 aa20.63■□□□□ 0.89
CCDC47-202ENST00000403162 FCHO1O14526 889 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 TOM1L1O75674 476 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 MYL2P10916 166 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 NEFHP12036 1026 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 ICAM3P32942 547 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 SESN3P58005 492 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 PSMC1P62191 440 aaKnown RBP20.62■□□□□ 0.89
CCDC47-202ENST00000403162 MAP2K5Q13163 448 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 ZNF699Q32M78 642 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 ZNF467Q7Z7K2 595 aaPredicted RBP20.62■□□□□ 0.89
CCDC47-202ENST00000403162 FBXO16Q8IX29 292 aaPredicted RBP20.62■□□□□ 0.89
CCDC47-202ENST00000403162 ARHGAP24Q8N264 748 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 NPLOC4Q8TAT6 608 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 NRG4Q8WWG1 115 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 SPATS2LQ9NUQ6 558 aaKnown RBP20.62■□□□□ 0.89
CCDC47-202ENST00000403162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.62■□□□□ 0.895e-7■■■■□ 24.2
CCDC47-202ENST00000403162 TJP2Q9UDY2 1190 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 PLXNA1Q9UIW2 1896 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 TTLL13PA6NNM8 815 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 A8MXQ7 604 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 CAPN9O14815 690 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 MED7O43513 233 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 CALRP27797 417 aaKnown RBP20.62■□□□□ 0.89
CCDC47-202ENST00000403162 ROR1Q01973 937 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 ACAP1Q15027 740 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 SCARA5Q6ZMJ2 495 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 LRRC74BQ6ZQY2 392 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 SPATA18Q8TC71 538 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 MAML3Q96JK9 1138 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 SYT15Q9BQS2 421 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 MRPL4Q9BYD3 311 aaKnown RBP20.62■□□□□ 0.89
CCDC47-202ENST00000403162 XYLT2Q9H1B5 865 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 RSAD1Q9HA92 442 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 RNF186Q9NXI6 227 aa20.62■□□□□ 0.89
CCDC47-202ENST00000403162 IGKV6D-21A0A0A0MT36 114 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 OGTO15294 1046 aa20.61■□□□□ 0.89
CCDC47-202ENST00000403162 CHADO15335 359 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms