RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.79■■□□□ 1.881e-8■■□□□ 11.7
CPNE1-205ENST00000401607 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.79■■□□□ 1.88
CPNE1-205ENST00000401607 FNDC1Q4ZHG4 1894 aaPredicted RBP26.79■■□□□ 1.88
CPNE1-205ENST00000401607 TBKBP1A7MCY6 615 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 SYN3O14994 580 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 CLTBP09497 229 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 DESP17661 470 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 ATXN1P54253 815 aaKnown RBP26.79■■□□□ 1.88
CPNE1-205ENST00000401607 DRG2P55039 364 aaKnown RBP26.79■■□□□ 1.88
CPNE1-205ENST00000401607 YWHAZP63104 245 aaKnown RBP26.79■■□□□ 1.88
CPNE1-205ENST00000401607 NNTQ13423 1086 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 LRRC26Q2I0M4 334 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 HFE2Q6ZVN8 426 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 TEKT4Q8WW24 435 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 PAWRQ96IZ0 340 aaKnown RBP26.79■■□□□ 1.88
CPNE1-205ENST00000401607 SLC2A13Q96QE2 648 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 TBCBQ99426 244 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 MRPL9Q9BYD2 267 aaKnown RBP26.79■■□□□ 1.88
CPNE1-205ENST00000401607 C11orf49Q9H6J7 331 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 CNGB3Q9NQW8 809 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 CALCOCO1Q9P1Z2 691 aa26.79■■□□□ 1.88
CPNE1-205ENST00000401607 VWA8A3KMH1 1905 aa26.78■■□□□ 1.88
CPNE1-205ENST00000401607 OR4Q2P0C623 313 aa26.78■■□□□ 1.88
CPNE1-205ENST00000401607 BOLA3Q53S33 107 aa26.78■■□□□ 1.88
CPNE1-205ENST00000401607 OTUD1Q5VV17 481 aaPredicted RBP26.78■■□□□ 1.88
CPNE1-205ENST00000401607 SNRNP25Q9BV90 132 aaKnown RBP26.78■■□□□ 1.88
CPNE1-205ENST00000401607 ZCWPW1Q9H0M4 648 aa26.78■■□□□ 1.88
CPNE1-205ENST00000401607 DMAP1Q9NPF5 467 aaPredicted RBP26.78■■□□□ 1.88
CPNE1-205ENST00000401607 GPATCH2LQ9NWQ4 482 aa26.78■■□□□ 1.88
CPNE1-205ENST00000401607 SNX24Q9Y343 169 aa26.78■■□□□ 1.88
CPNE1-205ENST00000401607 LIASO43766 372 aa26.77■■□□□ 1.88
CPNE1-205ENST00000401607 ALDH2P05091 517 aa26.77■■□□□ 1.88
CPNE1-205ENST00000401607 CDH6P55285 790 aa26.77■■□□□ 1.88
CPNE1-205ENST00000401607 VARS2Q5ST30 1063 aaKnown RBP26.77■■□□□ 1.88
CPNE1-205ENST00000401607 CNKSR3Q6P9H4 555 aa26.77■■□□□ 1.88
CPNE1-205ENST00000401607 BBS12Q6ZW61 710 aa26.77■■□□□ 1.88
CPNE1-205ENST00000401607 STRADAQ7RTN6 431 aa26.77■■□□□ 1.88
CPNE1-205ENST00000401607 ATL2Q8NHH9 583 aa26.77■■□□□ 1.88
CPNE1-205ENST00000401607 COLEC11Q9BWP8 271 aa26.77■■□□□ 1.88
CPNE1-205ENST00000401607 GPR62Q9BZJ7 368 aa26.77■■□□□ 1.88
CPNE1-205ENST00000401607 SPDYE4A6NLX3 237 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 NOS2P35228 1153 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 KRT17Q04695 432 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 PKN2Q16513 984 aaKnown RBP26.76■■□□□ 1.88
CPNE1-205ENST00000401607 SLC25A52Q3SY17 297 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 ZC3H12AQ5D1E8 599 aaKnown RBP26.76■■□□□ 1.88
CPNE1-205ENST00000401607 BHLHA9Q7RTU4 235 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 NT5C3BQ969T7 300 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 TMEM175Q9BSA9 504 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 VIPAS39Q9H9C1 493 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 GRHL1Q9NZI5 618 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 OGFRQ9NZT2 677 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 HPCAL4Q9UM19 191 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 FAN1Q9Y2M0 1017 aa26.76■■□□□ 1.88
CPNE1-205ENST00000401607 PATJQ8NI35 1801 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 YJEFN3A6XGL0 299 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 E7ENQ6 273 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 MDM4O15151 490 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 CST8O60676 142 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 FYNP06241 537 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 GALTP07902 379 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 USP17L7P0C7H9 530 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 RPL21P46778 160 aaKnown RBP26.76■■□□□ 1.87
CPNE1-205ENST00000401607 SULT1E1P49888 294 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 PITX1P78337 314 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-205ENST00000401607 MMRN1Q13201 1228 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 DPYSL3Q14195 570 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 CA9Q16790 459 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 DCAF6Q58WW2 860 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 FAM171A1Q5VUB5 890 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 DRICH1Q6PGQ1 229 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-205ENST00000401607 C4orf50Q6ZRC1 276 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 BNIPLQ7Z465 357 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 SPATA2LQ8IUW3 424 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-205ENST00000401607 GRK7Q8WTQ7 553 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 CCDC114Q96M63 670 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 NPY6RQ99463 290 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 CALN1Q9BXU9 219 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 POPDC2Q9HBU9 364 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 ZDHHC18Q9NUE0 388 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 DNPEPQ9ULA0 475 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 NEU2Q9Y3R4 380 aa26.76■■□□□ 1.87
CPNE1-205ENST00000401607 LBX1P52954 281 aa26.75■■□□□ 1.87
CPNE1-205ENST00000401607 IKBKEQ14164 716 aa26.75■■□□□ 1.87
CPNE1-205ENST00000401607 MRPL58Q14197 206 aaKnown RBP26.75■■□□□ 1.87
CPNE1-205ENST00000401607 PPP1R7Q15435 360 aa26.75■■□□□ 1.87
CPNE1-205ENST00000401607 SLC39A12Q504Y0 691 aa26.75■■□□□ 1.87
CPNE1-205ENST00000401607 SYPL2Q5VXT5 272 aa26.75■■□□□ 1.87
CPNE1-205ENST00000401607 LRRC43Q8N309 656 aa26.75■■□□□ 1.87
CPNE1-205ENST00000401607 TSEN2Q8NCE0 465 aaKnown RBP26.75■■□□□ 1.87
CPNE1-205ENST00000401607 HAUS1Q96CS2 278 aa26.75■■□□□ 1.87
CPNE1-205ENST00000401607 PNPLA8Q9NP80 782 aa26.75■■□□□ 1.87
CPNE1-205ENST00000401607 ZBED1O96006 694 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 FGFR3P22607 806 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 PBX3P40426 434 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 DYNLT1P63172 113 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 PTK6Q13882 451 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 ZDHHC24Q6UX98 284 aa26.74■■□□□ 1.87
CPNE1-205ENST00000401607 SYDE1Q6ZW31 735 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-205ENST00000401607 TMEM173Q86WV6 379 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms