RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 NENFQ9UMX5 172 aa16.76■□□□□ 0.27
HMGA1-204ENST00000401473 SOWAHDA6NJG2 315 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 IL9P15248 144 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 NSFP46459 744 aaKnown RBP16.75■□□□□ 0.27
HMGA1-204ENST00000401473 GSDMDP57764 484 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 MRPS5P82675 430 aaKnown RBP16.75■□□□□ 0.27
HMGA1-204ENST00000401473 CYP4F8P98187 520 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 MTF1Q14872 753 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 ALKBH5Q6P6C2 394 aaKnown RBP16.75■□□□□ 0.27
HMGA1-204ENST00000401473 MON1BQ7L1V2 547 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 MON1AQ86VX9 555 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 XYLT1Q86Y38 959 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 SCML4Q8N228 414 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 ANP32BQ92688 251 aaKnown RBP16.75■□□□□ 0.27
HMGA1-204ENST00000401473 BAG1Q99933 345 aaPredicted RBP16.75■□□□□ 0.27
HMGA1-204ENST00000401473 C11orf70Q9BRQ4 267 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 ATXN3LQ9H3M9 355 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 EHD2Q9NZN4 543 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 ADAM22Q9P0K1 906 aa16.75■□□□□ 0.27
HMGA1-204ENST00000401473 MRPS23Q9Y3D9 190 aaKnown RBP16.75■□□□□ 0.27
HMGA1-204ENST00000401473 A0A1W2PQH9 124 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 RTN2O75298 545 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 SMAD2Q15796 467 aaKnown RBP16.74■□□□□ 0.27
HMGA1-204ENST00000401473 SNX30Q5VWJ9 437 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 TXNDC8Q6A555 127 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 OLFML1Q6UWY5 402 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 FAM183BPQ6ZVS7 135 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 LRRC8AQ8IWT6 810 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 MCOLN2Q8IZK6 566 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 ATXN2LQ8WWM7 1075 aaKnown RBP16.74■□□□□ 0.27
HMGA1-204ENST00000401473 ING5Q8WYH8 240 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 RIPOR3Q96MK2 946 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 ZSWIM3Q96MP5 696 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 DEF6Q9H4E7 631 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 SYNCQ9H7C4 482 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 CLUHO75153 1309 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 NCOR1O75376 2440 aa16.74■□□□□ 0.27
HMGA1-204ENST00000401473 C2orf78A6NCI8 922 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 AKR1B10O60218 316 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 ABL1P00519 1130 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 FYNP06241 537 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 CEBPBP17676 345 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 FSHRP23945 695 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 MTHFRP42898 656 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 TEAD2Q15562 447 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 CCDC122Q5T0U0 273 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 OR6B2Q6IFH4 312 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 RAD9BQ6WBX8 426 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 VPS36Q86VN1 386 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 TMTC1Q8IUR5 882 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 LEMD2Q8NC56 503 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 ASB2Q96Q27 587 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 SLC22A12Q96S37 553 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 CYP2S1Q96SQ9 504 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 SLC46A2Q9BY10 475 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 RNF38Q9H0F5 515 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 TRPM5Q9NZQ8 1165 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 NUDT5Q9UKK9 219 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 ZNF197O14709 1029 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 TBX18O95935 607 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 BMP1P13497 986 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 CDC25CP30307 473 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 BSPRYQ5W0U4 402 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 OVCA2Q8WZ82 227 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 FGF13Q92913 245 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 CCSER2Q9H7U1 834 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 TLR8Q9NR97 1041 aaKnown RBP16.73■□□□□ 0.27
HMGA1-204ENST00000401473 BDP1A6H8Y1 2624 aa16.73■□□□□ 0.27
HMGA1-204ENST00000401473 NCANO14594 1321 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 TCRBV5S1A1TA0A578 114 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 GRAP2O75791 330 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 FBXO21O94952 628 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 RRM1P23921 792 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 PPP3CCP48454 512 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 YWHAGP61981 247 aaKnown RBP eCLIP16.72■□□□□ 0.27
HMGA1-204ENST00000401473 SLC6A3Q01959 620 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
HMGA1-204ENST00000401473 ZNF268Q14587 947 aaPredicted RBP16.72■□□□□ 0.27
HMGA1-204ENST00000401473 MAB21L3Q8N8X9 362 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 IPO4Q8TEX9 1081 aaKnown RBP16.72■□□□□ 0.27
HMGA1-204ENST00000401473 IRGQQ8WZA9 623 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 EDEM1Q92611 657 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 MCRS1Q96EZ8 462 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 VCPIP1Q96JH7 1222 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 DENND4AQ7Z401 1863 aa16.72■□□□□ 0.27
HMGA1-204ENST00000401473 GJB6O95452 261 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 SP100P23497 879 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 AAK1Q2M2I8 961 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 GET4Q7L5D6 327 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 NPAS3Q8IXF0 933 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 CCDC170Q8IYT3 715 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 PDZD8Q8NEN9 1154 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 NECTIN4Q96NY8 510 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 MYADMQ96S97 322 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 PACSIN1Q9BY11 444 aa16.71■□□□□ 0.27
HMGA1-204ENST00000401473 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
HMGA1-204ENST00000401473 TCF20Q9UGU0 1960 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms