RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TMEM119Q4V9L6 283 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ADGRF2Q8IZF7 708 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 RFWD2Q8NHY2 731 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 SPIRE2Q8WWL2 714 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 RIN2Q8WYP3 895 aaPredicted RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 CENPTQ96BT3 561 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF512Q96ME7 567 aaPredicted RBP8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM111AQ96PZ2 611 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 TSPAN18Q96SJ8 248 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 CEP44Q9C0F1 390 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 HEY2Q9UBP5 337 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 TMCC3Q9ULS5 477 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF711Q9Y462 761 aa8.63□□□□□ -1.03
SPTLC3-201ENST00000399002 SLC37A4O43826 429 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 GRIN3BO60391 1043 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 LRG1P02750 347 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PAEPP09466 180 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 TPBGLP0DKB5 382 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ALOX15P16050 662 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 HOXB6P17509 224 aaKnown RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 GCLCP48506 637 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ST13P50502 369 aaKnown RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF268Q14587 947 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 RCN1Q15293 331 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PREPLQ4J6C6 727 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 CEP78Q5JTW2 689 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP4A22Q5TCH4 519 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 MROH9Q5TGP6 573 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ANKRD13AQ8IZ07 590 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF507Q8TCN5 953 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 TMEM176AQ96HP8 235 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 APOPT1Q96IL0 206 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PPP1R10Q96QC0 940 aaKnown RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 OLFM1Q99784 485 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM153AQ9UHL3 310 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ADGRB2O60241 1585 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 M0QYT0 321 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ERBB2P04626 1255 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PDGFRBP09619 1106 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 TARSP26639 723 aaKnown RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PIK3CGP48736 1102 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ZCWPW2Q504Y3 356 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ARMCX4Q5H9R4 360 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 TAF2Q6P1X5 1199 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 DENND1BQ6P3S1 775 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 IYDQ6PHW0 289 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 TTC30AQ86WT1 665 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 LZTR1Q8N653 840 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PPP1R36Q96LQ0 422 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 RAD18Q9NS91 495 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 NCKIPSDQ9NZQ3 722 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 USP18Q9UMW8 372 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 SORCS3Q9UPU3 1222 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 LZTS3O60299 673 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 KATNA1O75449 491 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 BMP10O95393 424 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 TCF3P15923 654 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 CCDC85BQ15834 202 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 MGAT5BQ3V5L5 792 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 RNF180Q86T96 592 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ERO1BQ86YB8 467 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 NOA1Q8NC60 698 aaKnown RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 MRPS26Q9BYN8 205 aaKnown RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 DCLK3Q9C098 648 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 IMPAD1Q9NX62 359 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 SPATA31A5Q5VU36 1347 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 SPATA31A7Q8IWB4 1347 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 CAND2O75155 1236 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PRIM2P49643 509 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 RAB14P61106 215 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 TROAPQ12815 778 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 NFIAQ12857 509 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PRKAA1Q13131 559 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 TOP3AQ13472 1001 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 GALNT4Q8N4A0 578 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 EPS8L3Q8TE67 593 aaKnown RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 UCMAQ8WVF2 138 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 DLG3Q92796 817 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 KCTD14Q9BQ13 255 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 MARCOQ9UEW3 520 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 DPP7Q9UHL4 492 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 C15orf38-AP3S2A0A0A6YYH1 394 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 F8W810 466 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 RNF103O00237 685 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ATMINO43313 823 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 DYRK3O43781 588 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 SERPINE1P05121 402 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PPIL2Q13356 520 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ERMARDQ5T6L9 678 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ARPINQ7Z6K5 226 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF557Q8N988 423 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 SETD9Q8NE22 299 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 RMDN2Q96LZ7 410 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 AGBL1Q96MI9 1066 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PNKPQ96T60 521 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 IRX2Q9BZI1 471 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 PXMP2Q9NR77 195 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 RAB21Q9UL25 225 aa8.62□□□□□ -1.03
SPTLC3-201ENST00000399002 ANKRD65E5RJM6 399 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms