RNA–Protein interactions for RNA: ENST00000398455.3

HIGD1C-201, Transcript of HIG1 hypoxia inducible domain family member 1C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1C, Length 371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1C-201ENST00000398455 ANXA1P04083 346 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 CD1AP06126 327 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 SLC3A2P08195 630 aaKnown RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 CNPP09543 421 aaKnown RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 MTHFD1P11586 935 aaKnown RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 BTF3P20290 206 aaKnown RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 MGAT1P26572 445 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 UBA7P41226 1012 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 POLD2P49005 469 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 PTTG1IPP53801 180 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 PRKAA2P54646 552 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 CUL4AQ13619 759 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 R3HDM1Q15032 1099 aaKnown RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 TSTQ16762 297 aaKnown RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 PABPC1LQ4VXU2 614 aaKnown RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 SLC9C2Q5TAH2 1124 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 NFRKBQ6P4R8 1299 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 DRICH1Q6PGQ1 229 aaPredicted RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 TMTC3Q6ZXV5 915 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 MED25Q71SY5 747 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 ZSCAN30Q86W11 494 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 SYT12Q8IV01 421 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 NGEFQ8N5V2 710 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 IL17RDQ8NFM7 739 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 CREB3L4Q8TEY5 395 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 NSUN4Q96CB9 384 aaKnown RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 ZG16BQ96DA0 208 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 RSF1Q96T23 1441 aaPredicted RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 NDC1Q9BTX1 674 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 TAF1DQ9H5J8 278 aaPredicted RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 SLAMF7Q9NQ25 335 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 HEYLQ9NQ87 328 aaPredicted RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 BAZ1AQ9NRL2 1556 aaPredicted RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 CFDP1Q9UEE9 299 aaPredicted RBP4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 TBC1D29Q9UFV1 150 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 VPS28Q9UK41 221 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 FRMD4BQ9Y2L6 1034 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 DTNAQ9Y4J8 743 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 CYP46A1Q9Y6A2 500 aa4.42□□□□□ -1.7
HIGD1C-201ENST00000398455 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 PABPN1LA6NDY0 278 aaKnown RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 PRSS29PA6NIE9 313 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 H0Y3Z8 333 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 PLSCR1O15162 318 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 PTP4A3O75365 173 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 NTSR2O95665 410 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 SCGB1D1O95968 90 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 GNAI3P08754 354 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 CSF1P09603 554 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 TGFB3P10600 412 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 ALAS1P13196 640 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 SLC6A2P23975 617 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 SLC6A4P31645 630 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 APOBEC3AP31941 199 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 CHN2P52757 468 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 ARF3P61204 181 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 GNAI1P63096 354 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 POU6F2P78424 691 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 ARF1P84077 181 aaKnown RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 NHLH2Q02577 135 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 SCAPQ12770 1279 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 BAK1Q16611 211 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 SLC5A9Q2M3M2 681 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 TMTC4Q5T4D3 741 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 ATPAF1Q5TC12 328 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 DCAF12L1Q5VU92 463 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 NAIF1Q69YI7 327 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 HTR3DQ70Z44 454 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 B4GALNT4Q76KP1 1039 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 RPAP2Q8IXW5 612 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 TMEM57Q8N5G2 664 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 DNAJC5GQ8N7S2 189 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 USP38Q8NB14 1042 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 NLGN4YQ8NFZ3 816 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 SCAMP5Q8TAC9 235 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 SSH3Q8TE77 659 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 EXTL1Q92935 676 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 ATP2A3Q93084 1043 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 SPSB4Q96A44 273 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 MPHOSPH8Q99549 860 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 BAG1Q99933 345 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 PCDHAC1Q9H158 963 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 NOD2Q9HC29 1040 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 G6PC2Q9NQR9 355 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 KRT84Q9NSB2 600 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 RLIMQ9NVW2 624 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 HAUS2Q9NVX0 235 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 CWC25Q9NXE8 425 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 FAM30AQ9NZY2 134 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 LPAR3Q9UBY5 353 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 MID2Q9UJV3 735 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 ZMYND8Q9ULU4 1186 aaPredicted RBP4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 TESMINQ9Y4I5 508 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 PASKQ96RG2 1323 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 KAT6BQ8WYB5 2073 aa4.41□□□□□ -1.7
HIGD1C-201ENST00000398455 CDHR4A6H8M9 788 aa4.4□□□□□ -1.71
HIGD1C-201ENST00000398455 PRSS23O95084 383 aa4.4□□□□□ -1.71
HIGD1C-201ENST00000398455 ITGB1P05556 798 aa4.4□□□□□ -1.71
HIGD1C-201ENST00000398455 HNRNPA1P09651 372 aaKnown RBP eCLIP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms