RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 UNC13DQ70J99 1090 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 ARMCX6Q7L4S7 300 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 DDX42Q86XP3 938 aaKnown RBP eCLIP12.77□□□□□ -0.37
TFF3-202ENST00000398431 MIB1Q86YT6 1006 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 SYT12Q8IV01 421 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 BBS7Q8IWZ6 715 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 FUKQ8N0W3 1084 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 IQUBQ8NA54 791 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 PDZD8Q8NEN9 1154 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 WHAMMQ8TF30 809 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 FBXO32Q969P5 355 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 SYAP1Q96A49 352 aaPredicted RBP12.77□□□□□ -0.37
TFF3-202ENST00000398431 OTUB2Q96DC9 234 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 SMOQ99835 787 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 BLZF1Q9H2G9 400 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 SMYD3Q9H7B4 428 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 CD248Q9HCU0 757 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 POLMQ9NP87 494 aaPredicted RBP12.77□□□□□ -0.37
TFF3-202ENST00000398431 SLC39A2Q9NP94 309 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 PILRBQ9UKJ0 227 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 CEP192Q8TEP8 1941 aa12.77□□□□□ -0.37
TFF3-202ENST00000398431 TCRBV21S2A2A0A5A6 115 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 TBC1D3BA6NDS4 549 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 HOXC11O43248 304 aaPredicted RBP12.76□□□□□ -0.37
TFF3-202ENST00000398431 MAP3K13O43283 966 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 CUTAO60888 179 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 VNN1O95497 513 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 GABRG2P18507 467 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 TUBP50607 506 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 SLC5A3P53794 718 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 SPDYCQ5MJ68 293 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 SLC23A3Q6PIS1 610 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 FAM35AQ86V20 835 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 KCNV2Q8TDN2 545 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 PARD3BQ8TEW8 1205 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 HMGB4Q8WW32 186 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 SPHK2Q9NRA0 654 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 DMAC2Q9NW81 257 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 COMMD8Q9NX08 183 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 GMIPQ9P107 970 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 ZMIZ1Q9ULJ6 1067 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 STARD13Q9Y3M8 1113 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 UBE4BO95155 1302 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 ADAMTS9Q9P2N4 1935 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 CACNA1EQ15878 2313 aa12.76□□□□□ -0.37
TFF3-202ENST00000398431 PVALEFA0A1B0GWK0 134 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 A0A1W2PQF6 199 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 LRRIQ3A6PVS8 624 aaPredicted RBP12.75□□□□□ -0.37
TFF3-202ENST00000398431 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.75□□□□□ -0.37
TFF3-202ENST00000398431 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
TFF3-202ENST00000398431 YEATS4O95619 227 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 TBX18O95935 607 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 ENGP17813 658 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 ITPKAP23677 461 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 LMAN2Q12907 356 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 CUL4BQ13620 913 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 KNOP1Q1ED39 458 aaKnown RBP12.75□□□□□ -0.37
TFF3-202ENST00000398431 HTR3DQ70Z44 454 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 PIP4P1Q86T03 277 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 ACOT1Q86TX2 421 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 CRYBG2Q8N1P7 616 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 DEFB119Q8N690 84 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 GATA6Q92908 595 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 SNX21Q969T3 373 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 P2RY11Q96G91 374 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 ACOX2Q99424 681 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 MED10Q9BTT4 135 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 SCNM1Q9BWG6 230 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 KLF16Q9BXK1 252 aaPredicted RBP12.75□□□□□ -0.37
TFF3-202ENST00000398431 CSNK1G1Q9HCP0 422 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 FSCN3Q9NQT6 498 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 BCCIPQ9P287 314 aaKnown RBP eCLIP12.75□□□□□ -0.37
TFF3-202ENST00000398431 CGNQ9P2M7 1197 aaKnown RBP12.75□□□□□ -0.37
TFF3-202ENST00000398431 DEC1Q9P2X7 70 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 SH3BP1Q9Y3L3 701 aa12.75□□□□□ -0.37
TFF3-202ENST00000398431 ATXN2Q99700 1313 aaKnown RBP12.74□□□□□ -0.37
TFF3-202ENST00000398431 KLRC4O43908 158 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 EXOC3O60645 756 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 PHACTR2O75167 634 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 AP1G2O75843 785 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 WASP42768 502 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 MAPK8P45983 427 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 DLG4P78352 724 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 SEMA3BQ13214 749 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 NCOA4Q13772 614 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 BYSLQ13895 437 aaKnown RBP12.74□□□□□ -0.37
TFF3-202ENST00000398431 ANO4Q32M45 955 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 ZNF667Q5HYK9 610 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 LYSMD4Q5XG99 296 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 PGBD3Q8N328 593 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 ZNF513Q8N8E2 541 aaPredicted RBP12.74□□□□□ -0.37
TFF3-202ENST00000398431 TERB1Q8NA31 727 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 SMARCD1Q96GM5 515 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 TNIP3Q96KP6 325 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 NUSAP1Q9BXS6 441 aaKnown RBP12.74□□□□□ -0.37
TFF3-202ENST00000398431 ADAM33Q9BZ11 813 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 CAPN10Q9HC96 672 aa12.74□□□□□ -0.37
TFF3-202ENST00000398431 DMAP1Q9NPF5 467 aaPredicted RBP12.74□□□□□ -0.37
TFF3-202ENST00000398431 OSER1Q9NX31 292 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms