RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 ZNF507Q8TCN5 953 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 SPPL2BQ8TCT7 592 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 BPIFB1Q8TDL5 484 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 CSGALNACT1Q8TDX6 532 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 POMGNT1Q8WZA1 660 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 USP13Q92995 863 aaPredicted RBP7.35□□□□□ -1.23
SUMO3-202ENST00000397893 SAAL1Q96ER3 474 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 CNOT6LQ96LI5 555 aaKnown RBP7.35□□□□□ -1.23
SUMO3-202ENST00000397893 MYRFLQ96LU7 910 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 CCDC42Q96M95 316 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 ACCSQ96QU6 501 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 MMS19Q96T76 1030 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 SEPT5Q99719 369 aaPredicted RBP7.35□□□□□ -1.23
SUMO3-202ENST00000397893 CBWD1Q9BRT8 395 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 FAM213AQ9BRX8 229 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 TUBGCP2Q9BSJ2 902 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 DEF6Q9H4E7 631 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 NHEJ1Q9H9Q4 299 aaPredicted RBP7.35□□□□□ -1.23
SUMO3-202ENST00000397893 FBRSL1Q9HCM7 1045 aaKnown RBP7.35□□□□□ -1.23
SUMO3-202ENST00000397893 GKN1Q9NS71 199 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 GDAP2Q9NXN4 497 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 TBC1D7Q9P0N9 293 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 NCDNQ9UBB6 729 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 TRIM10Q9UDY6 481 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 CCL26Q9Y258 94 aa7.35□□□□□ -1.23
SUMO3-202ENST00000397893 REXO2Q9Y3B8 237 aaKnown RBP7.35□□□□□ -1.23
SUMO3-202ENST00000397893 PTPRJQ12913 1337 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 GOLGA8IPA6NC78 632 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 GOLGA6BA6NDN3 693 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 GOLGA8JA6NMD2 632 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 ENC1O14682 589 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 TRDMT1O14717 391 aaKnown RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 EXTL3O43909 919 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 NOL4O94818 638 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 ITGB3P05106 788 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 RETP07949 1114 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 TCP1P17987 556 aaKnown RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 CDC25CP30307 473 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 POLR2BP30876 1174 aaKnown RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 PNPLA4P41247 253 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 PAFAH1B1P43034 410 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 SRSF5Q13243 272 aaKnown RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 LRRC32Q14392 662 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 VEPH1Q14D04 833 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 PON2Q15165 354 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 NFE2Q16621 373 aaPredicted RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 ITPRIPL2Q3MIP1 535 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 SV2CQ496J9 727 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 TTC31Q49AM3 519 aaPredicted RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 ARHGAP15Q53QZ3 475 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 FIGNQ5HY92 759 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 TMEM196Q5HYL7 178 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 PPP1R15BQ5SWA1 713 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 SDHAF4Q5VUM1 108 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 TXNDC8Q6A555 127 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 LAIR1Q6GTX8 287 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 FSTL4Q6MZW2 842 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 TTI2Q6NXR4 508 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 FAM171BQ6P995 826 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 GBP6Q6ZN66 633 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 MON1AQ86VX9 555 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 LONP2Q86WA8 852 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 YAF2Q8IY57 180 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 DCP1BQ8IZD4 617 aaKnown RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 SYNPOQ8N3V7 929 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 LRRC52Q8N7C0 313 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 STKLD1Q8NE28 680 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 OR5B17Q8NGF7 314 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 SPATA18Q8TC71 538 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 COG1Q8WTW3 980 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 EZH1Q92800 747 aaPredicted RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 SLC22A12Q96S37 553 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 TSG101Q99816 390 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 HINFPQ9BQA5 517 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 ACBD6Q9BR61 282 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 SELENOOQ9BVL4 669 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 FAM117AQ9C073 453 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 LRRC27Q9C0I9 530 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 LUC7LQ9NQ29 371 aaKnown RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 ABI2Q9NYB9 513 aaPredicted RBP7.34□□□□□ -1.23
SUMO3-202ENST00000397893 RSPH14Q9UHP6 348 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 ZMYM5Q9UJ78 669 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 GTF3C4Q9UKN8 822 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 AGAP1Q9UPQ3 857 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 HYOU1Q9Y4L1 999 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 NME7Q9Y5B8 376 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 PCDHB5Q9Y5E4 795 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 USP24Q9UPU5 2620 aa7.34□□□□□ -1.23
SUMO3-202ENST00000397893 MAP1BP46821 2468 aaKnown RBP7.34□□□□□ -1.24
SUMO3-202ENST00000397893 MACROD2A1Z1Q3 448 aa7.33□□□□□ -1.24
SUMO3-202ENST00000397893 GOLGA6CA6NDK9 693 aa7.33□□□□□ -1.24
SUMO3-202ENST00000397893 A6NNZ2 444 aa7.33□□□□□ -1.24
SUMO3-202ENST00000397893 PRR5-ARHGAP8B1AHC4 643 aa7.33□□□□□ -1.24
SUMO3-202ENST00000397893 RNF225M0QZC1 329 aaPredicted RBP7.33□□□□□ -1.24
SUMO3-202ENST00000397893 DPYSL4O14531 572 aa7.33□□□□□ -1.24
SUMO3-202ENST00000397893 KLRC4O43908 158 aa7.33□□□□□ -1.24
SUMO3-202ENST00000397893 HSF2BPO75031 334 aa7.33□□□□□ -1.24
SUMO3-202ENST00000397893 LRP3O75074 770 aa7.33□□□□□ -1.24
SUMO3-202ENST00000397893 PRPF6O94906 941 aaKnown RBP7.33□□□□□ -1.24
SUMO3-202ENST00000397893 GCNT3O95395 438 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms