RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 FAM71AQ8IYT1 594 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 SLC35F5Q8WV83 523 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 KCTD13Q8WZ19 329 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 ZFYVE19Q96K21 471 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 SPAG5Q96R06 1193 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 ULBP1Q9BZM6 244 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 TSPY26PQ9H489 355 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 NLRC4Q9NPP4 1024 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 ST7Q9NRC1 585 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 DAAM1Q9Y4D1 1078 aa26.68■■□□□ 1.86
TSPAN4-207ENST00000397411 ATP5C1P36542 298 aaKnown RBP26.67■■□□□ 1.86
TSPAN4-207ENST00000397411 KPNA1P52294 538 aaPredicted RBP26.67■■□□□ 1.86
TSPAN4-207ENST00000397411 MLF2Q15773 248 aaPredicted RBP26.67■■□□□ 1.86
TSPAN4-207ENST00000397411 PMF1Q6P1K2 205 aa26.67■■□□□ 1.86
TSPAN4-207ENST00000397411 DDX42Q86XP3 938 aaKnown RBP eCLIP26.67■■□□□ 1.86
TSPAN4-207ENST00000397411 HSFY1Q96LI6 401 aa26.67■■□□□ 1.86
TSPAN4-207ENST00000397411 ERGIC2Q96RQ1 377 aa26.67■■□□□ 1.86
TSPAN4-207ENST00000397411 NAA15Q9BXJ9 866 aaKnown RBP26.67■■□□□ 1.86
TSPAN4-207ENST00000397411 SIK3Q9Y2K2 1263 aa26.67■■□□□ 1.86
TSPAN4-207ENST00000397411 KRBA1A5PL33 1030 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 LEFTY2O00292 366 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 PIK3R2O00459 728 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 CLCN1P35523 988 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 PGFP49763 221 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 MTF1Q14872 753 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 C10orf120Q5SQS8 335 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 APTXQ7Z2E3 356 aaKnown RBP26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 SLC47A2Q86VL8 602 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 FBXL6Q8N531 539 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 GANQ9H2C0 597 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 NMUR1Q9HB89 426 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 RTN4Q9NQC3 1192 aaKnown RBP26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 HEBP1Q9NRV9 189 aa26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 DUS2Q9NX74 493 aaKnown RBP26.66■■□□□ 1.86
TSPAN4-207ENST00000397411 PDGFBP01127 241 aaPredicted RBP26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 ACADSBP45954 432 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 IFNAR2P48551 515 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 YWHAGP61981 247 aaKnown RBP eCLIP26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 PRKCQQ04759 706 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 BTBD8Q5XKL5 378 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 PM20D1Q6GTS8 502 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 RSRC2Q7L4I2 434 aaKnown RBP26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 CACNA2D4Q7Z3S7 1137 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 SCD5Q86SK9 330 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 TTC8Q8TAM2 541 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 CDK5RAP1Q96SZ6 601 aaKnown RBP26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 TRPV5Q9NQA5 729 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 CNGB3Q9NQW8 809 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 CFAP97Q9P2B7 532 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 CEP83Q9Y592 693 aa26.65■■□□□ 1.86
TSPAN4-207ENST00000397411 TEX33O43247 280 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 OLFM2O95897 454 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 TBX18O95935 607 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 STAT1P42224 750 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 GPD2P43304 727 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 GOLGA8FQ08AF8 430 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 GOLGA8DPQ0D2H9 430 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 PDGFRLQ15198 375 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 ZNF77Q15935 545 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 MEA1Q16626 185 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 LRSAM1Q6UWE0 723 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 TPRG1Q6ZUI0 275 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 PASD1Q8IV76 773 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 NDRG1Q92597 394 aaKnown RBP26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 GOLGA1Q92805 767 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 MIS12Q9H081 205 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 CYLDQ9NQC7 956 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 OSER1Q9NX31 292 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 CLIC5Q9NZA1 410 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 DNMT3LQ9UJW3 386 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 NUDT5Q9UKK9 219 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 SH3BP1Q9Y3L3 701 aa26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 HELZP42694 1942 aaKnown RBP26.64■■□□□ 1.86
TSPAN4-207ENST00000397411 TICRRQ7Z2Z1 1910 aa26.63■■□□□ 1.85
TSPAN4-207ENST00000397411 F8VZ95 297 aa26.63■■□□□ 1.85
TSPAN4-207ENST00000397411 GFPT2O94808 682 aa26.63■■□□□ 1.85
TSPAN4-207ENST00000397411 FBXO21O94952 628 aa26.63■■□□□ 1.85
TSPAN4-207ENST00000397411 USP4Q13107 963 aa26.63■■□□□ 1.85
TSPAN4-207ENST00000397411 IER5LQ5T953 404 aa26.63■■□□□ 1.85
TSPAN4-207ENST00000397411 NOX5Q96PH1 765 aa26.63■■□□□ 1.85
TSPAN4-207ENST00000397411 TBC1D17Q9HA65 648 aa26.63■■□□□ 1.85
TSPAN4-207ENST00000397411 MAN2B1O00754 1011 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 IRF1P10914 325 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 TCF3P15923 654 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 SOX5P35711 763 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 SNX16P57768 344 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 FANCCQ00597 558 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 TNK2Q07912 1038 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 ITPRIPL2Q3MIP1 535 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 ZNF852Q6ZMS4 543 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 STK32AQ8WU08 396 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 RNF139Q8WU17 664 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 OSCP1Q8WVF1 389 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 NAP1L5Q96NT1 182 aaPredicted RBP26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 EBF3Q9H4W6 596 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 GTSE1Q9NYZ3 720 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 PCDHGC3Q9UN70 934 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 WNT6Q9Y6F9 365 aa26.62■■□□□ 1.85
TSPAN4-207ENST00000397411 PIAS3Q9Y6X2 628 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms