RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CDH22Q9UJ99 828 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 MTCL1Q9Y4B5 1905 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 IRAK3Q9Y616 596 aa17.8■□□□□ 0.44
TSPAN4-205ENST00000397406 TMEM191CA6NGB0 347 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 C2orf71A6NGG8 1288 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 SIGLEC16A6NMB1 481 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 TRIM66O15016 1216 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 TEX28O15482 410 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 PALMO75781 387 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 CXCL14O95715 111 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 TUBB4AP04350 444 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 HAPLN1P10915 354 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 TNNT1P13805 278 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 SCNN1AP37088 669 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 GRIK1P39086 918 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 TKTL1P51854 596 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 RPL7AP62424 266 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 SLC6A3Q01959 620 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 FAM102AQ5T9C2 384 aaPredicted RBP17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 SYCE2Q6PIF2 218 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 SYT10Q6XYQ8 523 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 TMEM184AQ6ZMB5 413 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 TMC7Q7Z402 723 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 SLFN11Q7Z7L1 901 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 BTBD6Q96KE9 485 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 ALS2CR12Q96Q35 445 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 SELENOOQ9BVL4 669 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 METTL5Q9NRN9 209 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 PRKAG3Q9UGI9 489 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 ANAPC7Q9UJX3 599 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 SLC27A5Q9Y2P5 690 aa17.79■□□□□ 0.44
TSPAN4-205ENST00000397406 CNPP09543 421 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 KRT3P12035 628 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 ATF2P15336 505 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 GPR15P49685 360 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 DUSP4Q13115 394 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 PDE12Q6L8Q7 609 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 C11orf63Q6NUN7 778 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 SCN4BQ8IWT1 228 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 SIX6OS1Q8N1H7 587 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 MRPL43Q8N983 215 aaKnown RBP17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 JOSD2Q8TAC2 188 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 SUSD6Q92537 303 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 MCEEQ96PE7 176 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 RRAGDQ9NQL2 400 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 CNGB3Q9NQW8 809 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 HSFX1Q9UBD0 423 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 TMEM59LQ9UK28 342 aa17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 USP15Q9Y4E8 981 aaPredicted RBP17.78■□□□□ 0.44
TSPAN4-205ENST00000397406 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 SOAT2O75908 522 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 FBXO21O94952 628 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 SEC24AO95486 1093 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 RFC1P35251 1148 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 OGDHQ02218 1023 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 ZNF252P-AS1Q0IIN9 211 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 TAF5Q15542 800 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 DDR2Q16832 855 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 SLC26A9Q7LBE3 791 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 BHLHA9Q7RTU4 235 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 SCML4Q8N228 414 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 PPP2R3CQ969Q6 453 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 CDCA3Q99618 268 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 SEPT5Q99719 369 aaPredicted RBP17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 C1QTNF1Q9BXJ1 281 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 ULBP1Q9BZM6 244 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 GOLPH3Q9H4A6 298 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 NGRNQ9NPE2 291 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 ENTPD7Q9NQZ7 604 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 DNAI1Q9UI46 699 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 USP3Q9Y6I4 520 aa17.77■□□□□ 0.44
TSPAN4-205ENST00000397406 CLASP2O75122 1294 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 SLC5A3P53794 718 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 DAOAP59103 153 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 MESDQ14696 234 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 MGAT5BQ3V5L5 792 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 SDHAF4Q5VUM1 108 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 PM20D1Q6GTS8 502 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 TRNP1Q6NT89 227 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 DCUN1D2Q6PH85 259 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 DAAM2Q86T65 1068 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 SCAMP5Q8TAC9 235 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 NDRG1Q92597 394 aaKnown RBP17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 SPATA17Q96L03 361 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 KLHL5Q96PQ7 755 aa17.76■□□□□ 0.43
TSPAN4-205ENST00000397406 MYO1FO00160 1098 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 GPR37L1O60883 481 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 FTCDO95954 541 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 ZBED1O96006 694 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 ATF6P18850 670 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 CA8P35219 290 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 TUFMP49411 452 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 RPL10AP62906 217 aaKnown RBP17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 EFHC1Q5JVL4 640 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 ANKRD54Q6NXT1 300 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 ARCQ7LC44 396 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 SYCE1Q8N0S2 351 aa17.75■□□□□ 0.43
TSPAN4-205ENST00000397406 EMC1Q8N766 993 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms