RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 KYAT1Q16773 422 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 DUSP28Q4G0W2 176 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 CCDC33Q8N5R6 958 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 FAM172AQ8WUF8 416 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 NXF3Q9H4D5 531 aaKnown RBP24.78■■□□□ 1.56
PABPN1-202ENST00000397276 UBN1Q9NPG3 1134 aa24.78■■□□□ 1.56
PABPN1-202ENST00000397276 AVILO75366 819 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 TFE3P19532 575 aaPredicted RBP24.77■■□□□ 1.56
PABPN1-202ENST00000397276 TAC1P20366 129 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 CA4P22748 312 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 IL9RQ01113 521 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 DNAJC3Q13217 504 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 CA9Q16790 459 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 PPP6R3Q5H9R7 873 aaPredicted RBP24.77■■□□□ 1.56
PABPN1-202ENST00000397276 CGB2Q6NT52 195 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 STRNO43815 780 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 SUN1O94901 812 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 ANKLE1Q8NAG6 615 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 CLEC4CQ8WTT0 213 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 KLF6Q99612 283 aaPredicted RBP24.77■■□□□ 1.56
PABPN1-202ENST00000397276 TINF2Q9BSI4 451 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 MAGEB5Q9BZ81 275 aa24.77■■□□□ 1.56
PABPN1-202ENST00000397276 GOLGA8RI6L899 631 aa24.76■■□□□ 1.56
PABPN1-202ENST00000397276 GEMIN4P57678 1058 aaKnown RBP24.76■■□□□ 1.56
PABPN1-202ENST00000397276 FAXCQ5TGI0 409 aa24.76■■□□□ 1.56
PABPN1-202ENST00000397276 IGDCC3Q8IVU1 814 aa24.76■■□□□ 1.56
PABPN1-202ENST00000397276 PDIK1LQ8N165 341 aa24.76■■□□□ 1.56
PABPN1-202ENST00000397276 NPLOC4Q8TAT6 608 aa24.76■■□□□ 1.56
PABPN1-202ENST00000397276 PITPNM3Q9BZ71 974 aa24.76■■□□□ 1.56
PABPN1-202ENST00000397276 PSMC3IPQ9P2W1 217 aaPredicted RBP24.76■■□□□ 1.56
PABPN1-202ENST00000397276 KRT4P19013 534 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 MSH2P43246 934 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 ATXN1P54253 815 aaKnown RBP24.76■■□□□ 1.55
PABPN1-202ENST00000397276 TDRPQ86YL5 185 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 ATP11CQ8NB49 1132 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 RNF157Q96PX1 679 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 FRMD8P1Q9BZ68 369 aaPredicted RBP24.76■■□□□ 1.55
PABPN1-202ENST00000397276 GJD2Q9UKL4 321 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 GRID1Q9ULK0 1009 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 GABBR2O75899 941 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 ADORA2BP29275 332 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 OLFML1Q6UWY5 402 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 FAM167BQ9BTA0 163 aa24.76■■□□□ 1.55
PABPN1-202ENST00000397276 C12orf65Q9H3J6 166 aaKnown RBP24.76■■□□□ 1.55
PABPN1-202ENST00000397276 SCN1AP35498 2009 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 A8MXQ7 604 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 PAPSS1O43252 624 aaPredicted RBP24.75■■□□□ 1.55
PABPN1-202ENST00000397276 ASMTLO95671 621 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 NOMO1Q15155 1222 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 SLC1A5Q15758 541 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 SLC27A1Q6PCB7 646 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 ZNF410Q86VK4 478 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 GCOM2Q9BZD3 368 aaPredicted RBP24.75■■□□□ 1.55
PABPN1-202ENST00000397276 ADAMTS10Q9H324 1103 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 SLCO1B3Q9NPD5 702 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 ARHGEF3Q9NR81 526 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 HESX1Q9UBX0 185 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 KIAA1257Q9ULG3 409 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 KCNN4O15554 427 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 CCDC130P13994 396 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 IL4RP24394 825 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 SDC4P31431 198 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 PHBP35232 272 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 FBXO41Q8TF61 875 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 PAFAH2Q99487 392 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 SLC5A4Q9NY91 659 aa24.75■■□□□ 1.55
PABPN1-202ENST00000397276 PEX19P40855 299 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 RNASELQ05823 741 aaKnown RBP24.74■■□□□ 1.55
PABPN1-202ENST00000397276 NR1H3Q13133 447 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 PLD5Q8N7P1 536 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 KHSRPQ92945 711 aaKnown RBP eCLIP24.74■■□□□ 1.551e-8■■□□□ 12.8
PABPN1-202ENST00000397276 FAF2Q96CS3 445 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 CLGNO14967 610 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 RECQL4O94761 1208 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 ENDOD1O94919 500 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 LMO2P25791 158 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 ELK3P41970 407 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 SLC6A3Q01959 620 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 ZNF618Q5T7W0 954 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 MICAL1Q8TDZ2 1067 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 GTF3C2Q8WUA4 911 aaPredicted RBP24.74■■□□□ 1.55
PABPN1-202ENST00000397276 SNX27Q96L92 541 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 ABHD16BQ9H3Z7 469 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 GOLGA2P5Q9HBQ8 144 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 RAB6BQ9NRW1 208 aa24.74■■□□□ 1.55
PABPN1-202ENST00000397276 TRIP11Q15643 1979 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 GPR32O75388 356 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 LCP1P13796 627 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 RBL1P28749 1068 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 TFDP2Q14188 446 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 SOWAHAQ2M3V2 549 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 DCAF4L1Q3SXM0 396 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 EFHC2Q5JST6 749 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 SLC35F5Q8WV83 523 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 SNRNP25Q9BV90 132 aaKnown RBP24.73■■□□□ 1.55
PABPN1-202ENST00000397276 SLC24A2Q9UI40 661 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 WDR91A4D1P6 747 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 NDC80O14777 642 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 GTF2A2P52657 109 aa24.73■■□□□ 1.55
PABPN1-202ENST00000397276 BCAR1P56945 870 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms