RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 IQGAP2Q13576 1575 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 RTN3O95197 1032 aaPredicted RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 IRX1P78414 480 aaPredicted RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 NCOA4Q13772 614 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 TSNQ15631 228 aaKnown RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 PLA2G4FQ68DD2 849 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 DHRS1Q96LJ7 313 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 CCDC115Q96NT0 180 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 PPP1R10Q96QC0 940 aaKnown RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 TMEM79Q9BSE2 394 aa12.71□□□□□ -0.37
SMU1-201ENST00000397149 TIMM8BQ9Y5J9 83 aaPredicted RBP12.71□□□□□ -0.37
SMU1-201ENST00000397149 ZMYM3Q14202 1370 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 SGCGQ13326 291 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 PDK1Q15118 436 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 C4orf46Q504U0 113 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 C2CD6Q53TS8 623 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.38
SMU1-201ENST00000397149 KBTBD2Q8IY47 623 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 DCP1BQ8IZD4 617 aaKnown RBP12.71□□□□□ -0.38
SMU1-201ENST00000397149 ZNF354BQ96LW1 612 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 ELOVL6Q9H5J4 265 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 LOC100506127A0A0U1RQW1 187 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 EFCAB10A6NFE3 127 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 LIN7AO14910 233 aaPredicted RBP12.71□□□□□ -0.38
SMU1-201ENST00000397149 SFNP31947 248 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 MDH1P40925 334 aaKnown RBP12.71□□□□□ -0.38
SMU1-201ENST00000397149 SLC11A2P49281 568 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 HMGCS2P54868 508 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.71□□□□□ -0.38
SMU1-201ENST00000397149 TXNRD1Q16881 649 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 EPC2Q52LR7 807 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 TTC39CQ8N584 583 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 TRNT1Q96Q11 434 aaKnown RBP12.71□□□□□ -0.38
SMU1-201ENST00000397149 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.38
SMU1-201ENST00000397149 HS6ST1O60243 411 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 ZNF432O94892 652 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 IFNA14P01570 189 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 GLRA4Q5JXX5 417 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 CYP20A1Q6UW02 462 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 ILKAPQ9H0C8 392 aaPredicted RBP12.7□□□□□ -0.38
SMU1-201ENST00000397149 VPS45Q9NRW7 570 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 RCOR1Q9UKL0 485 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 LTFP02788 710 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 FAAH2Q6GMR7 532 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 COLGALT2Q8IYK4 626 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 RIN2Q8WYP3 895 aaPredicted RBP12.7□□□□□ -0.38
SMU1-201ENST00000397149 RFFLQ8WZ73 363 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 FAM111AQ96PZ2 611 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 NLNQ9BYT8 704 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 UHRF1BP1LA0JNW5 1464 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 FAM92AA1XBS5 289 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 MYL4P12829 197 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 MAPK1P28482 360 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
SMU1-201ENST00000397149 ZCCHC7Q8N3Z6 543 aaKnown RBP12.7□□□□□ -0.38
SMU1-201ENST00000397149 KLHL32Q96NJ5 620 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 C8orf4Q9NR00 106 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 NPTXRO95502 500 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 CASP4P49662 377 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
SMU1-201ENST00000397149 RAPSNQ13702 412 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 PDIA6Q15084 440 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 NR6A1Q15406 480 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 TFB1MQ8WVM0 346 aaKnown RBP12.7□□□□□ -0.38
SMU1-201ENST00000397149 GRIP2Q9C0E4 1043 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 ACTR8Q9H981 624 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 JPH1Q9HDC5 661 aaPredicted RBP12.7□□□□□ -0.38
SMU1-201ENST00000397149 PLA2G4CQ9UP65 541 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
SMU1-201ENST00000397149 GRID2IPA4D2P6 1211 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 F5H5T6 163 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 IGFBP4P22692 258 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 ATP5F1P24539 256 aaPredicted RBP12.7□□□□□ -0.38
SMU1-201ENST00000397149 YME1L1Q96TA2 773 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 EPS8L2Q9H6S3 715 aa12.7□□□□□ -0.38
SMU1-201ENST00000397149 TMEM120BA0PK00 339 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 GGPS1O95749 300 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 STX5Q13190 355 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 BYSLQ13895 437 aaKnown RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 LIN54Q6MZP7 749 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 PI4K2AQ9BTU6 479 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 FAM50BQ9Y247 325 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 MGRN1O60291 552 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 NOS1APO75052 506 aaPredicted RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 LYNP07948 512 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 HOXB7P09629 217 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 GJA1P17302 382 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 KCNJ1P48048 391 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 SFSWAPQ12872 951 aaKnown RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 MTAPQ13126 283 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 SUZ12Q15022 739 aaKnown RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 RIPOR1Q6ZS17 1223 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 ATP6V0D2Q8N8Y2 350 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 CENPIQ92674 756 aaPredicted RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 RMND5BQ96G75 393 aaPredicted RBP12.69□□□□□ -0.38
SMU1-201ENST00000397149 TMEM169Q96HH4 297 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 VPS28Q9UK41 221 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 ZNF879B4DU55 563 aa12.69□□□□□ -0.38
SMU1-201ENST00000397149 M0QYT0 321 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms