RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 COCHO43405 550 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 OAS1P00973 400 aaKnown RBP30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 MMEP08473 750 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 RARGP13631 454 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 FERP16591 822 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 PSMC3P17980 439 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 PDCLQ13371 301 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 PM20D1Q6GTS8 502 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 SCD5Q86SK9 330 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 UBALD2Q8IYN6 164 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 TMEM35BQ8NCS4 154 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 STK32AQ8WU08 396 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 KIF9Q9HAQ2 790 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 OSER1Q9NX31 292 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 CYTH4Q9UIA0 394 aa30.87■■■□□ 2.53
CHCHD4-202ENST00000396914 PBX1P40424 430 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 TUBP50607 506 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 C10orf120Q5SQS8 335 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 BTBD8Q5XKL5 378 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 RSRC2Q7L4I2 434 aaKnown RBP30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 GAS2L3Q86XJ1 694 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 ZNF677Q86XU0 584 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 FMNL3Q8IVF7 1028 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 MFSD6LQ8IWD5 586 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 SCUBE3Q8IX30 993 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 BPIFB1Q8TDL5 484 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 DEPDC1BQ8WUY9 529 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 DDX1Q92499 740 aaKnown RBP30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 GOLGA1Q92805 767 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 PPP1R13BQ96KQ4 1090 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 BRD9Q9H8M2 597 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 SEPT11Q9NVA2 429 aaKnown RBP30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 NOCTQ9UK39 431 aaKnown RBP30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 NUDT5Q9UKK9 219 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 MYO6Q9UM54 1294 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 DUSP12Q9UNI6 340 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 CPQQ9Y646 472 aa30.86■■■□□ 2.53
CHCHD4-202ENST00000396914 BDP1A6H8Y1 2624 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 E5RJQ4 531 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 FBXO21O94952 628 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 SRFP11831 508 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 GDI1P31150 447 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 GPC5P78333 572 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 ZXDAP98168 799 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 CDR2Q01850 454 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 TADA2BQ86TJ2 420 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 WDTC1Q8N5D0 677 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 ZNF397Q8NF99 534 aaPredicted RBP30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 BAP1Q92560 729 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 THG1LQ9NWX6 298 aaKnown RBP30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 OBP2AQ9NY56 170 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 TTC28Q96AY4 2481 aa30.85■■■□□ 2.53
CHCHD4-202ENST00000396914 GABBR2O75899 941 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 TBX18O95935 607 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 ATP5C1P36542 298 aaKnown RBP30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 DAOAP59103 153 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 ZNF268Q14587 947 aaPredicted RBP30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 ASIC2Q16515 512 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 SFMBT2Q5VUG0 894 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 CC2D1AQ6P1N0 951 aaPredicted RBP30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 SH3RF2Q8TEC5 729 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 CLEC4CQ8WTT0 213 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 SLC4A5Q9BY07 1137 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 EDEM3Q9BZQ6 932 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 TRIM5Q9C035 493 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 MTPAPQ9NVV4 582 aaKnown RBP eCLIP30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 FBXL21Q9UKT6 434 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 ARHGAP26Q9UNA1 814 aa30.84■■■□□ 2.53
CHCHD4-202ENST00000396914 ZNF263O14978 683 aa30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 SNX16P57768 344 aa30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 SLC7A9P82251 487 aa30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 FIGNQ5HY92 759 aa30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 IPO4Q8TEX9 1081 aaKnown RBP30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 EDAQ92838 391 aa30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 LRRC3BQ96PB8 259 aa30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 CPXM1Q96SM3 734 aa30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 CDK5RAP1Q96SZ6 601 aaKnown RBP30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 CYLDQ9NQC7 956 aa30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 CLIC5Q9NZA1 410 aa30.83■■■□□ 2.53
CHCHD4-202ENST00000396914 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.83■■■□□ 2.536e-8■□□□□ 9.4
CHCHD4-202ENST00000396914 YJEFN3A6XGL0 299 aa30.82■■■□□ 2.52
CHCHD4-202ENST00000396914 E7ENQ6 273 aa30.82■■■□□ 2.52
CHCHD4-202ENST00000396914 IRGQQ8WZA9 623 aa30.82■■■□□ 2.52
CHCHD4-202ENST00000396914 FAM149B1Q96BN6 582 aa30.82■■■□□ 2.52
CHCHD4-202ENST00000396914 TTYH3Q9C0H2 523 aa30.82■■■□□ 2.52
CHCHD4-202ENST00000396914 NCOR1O75376 2440 aa30.82■■■□□ 2.52
CHCHD4-202ENST00000396914 PI4K2BG5E9Z4 385 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 MDM4O15151 490 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 LSM8O95777 96 aaKnown RBP30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 OLFM2O95897 454 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 NAA35Q5VZE5 725 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 BSPRYQ5W0U4 402 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 TMEM110Q86TL2 294 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 SCML4Q8N228 414 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 RNF139Q8WU17 664 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 EDEM1Q92611 657 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 IQCDQ96DY2 449 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 RASAL2Q9UJF2 1139 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 DNMT3LQ9UJW3 386 aa30.81■■■□□ 2.52
CHCHD4-202ENST00000396914 LEFTY2O00292 366 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms