RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SETD7Q8WTS6 366 aaKnown RBP8.98□□□□□ -0.97
SCFD1-202ENST00000396629 RAD54LQ92698 747 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 AK8Q96MA6 479 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 ACOX2Q99424 681 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 FAM213AQ9BRX8 229 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 ZHX3Q9H4I2 956 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 CD93Q9NPY3 652 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 SPHK2Q9NRA0 654 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 PCDHGB2Q9Y5G2 931 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 BPTFQ12830 3046 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 TMEM131Q92545 1883 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 F8VP50 259 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 TRIM24O15164 1050 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 TBCAO75347 108 aaKnown RBP8.98□□□□□ -0.97
SCFD1-202ENST00000396629 LDHAP00338 332 aaKnown RBP8.98□□□□□ -0.97
SCFD1-202ENST00000396629 ABL1P00519 1130 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 PRB1P04280 392 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 ATXN1LP0C7T5 689 aaKnown RBP8.98□□□□□ -0.97
SCFD1-202ENST00000396629 BNC1Q01954 994 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 CYP27A1Q02318 531 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 RILPL1Q5EBL4 403 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 SDE2Q6IQ49 451 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 TMEM25Q86YD3 366 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 GALNT15Q8N3T1 639 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 OVCA2Q8WZ82 227 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 CALML4Q96GE6 196 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 PCED1BQ96HM7 432 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 FAM84AQ96KN4 292 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 MRGPRX1Q96LB2 322 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 SLITRK1Q96PX8 696 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 CDC6Q99741 560 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 IL21RQ9HBE5 538 aa8.98□□□□□ -0.97
SCFD1-202ENST00000396629 MUC22E2RYF6 1773 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-202ENST00000396629 E9PAM4 449 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 GFRA2O00451 464 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 COCHO43405 550 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 CILPO75339 1184 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 CER1O95813 267 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 KRT19P08727 400 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 CD6P30203 668 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 MATKP42679 507 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 SNX30Q5VWJ9 437 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 GRAMD4Q6IC98 578 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 MARCH9Q86YJ5 346 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 BBS7Q8IWZ6 715 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 PDZD8Q8NEN9 1154 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 SLC39A7Q92504 469 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 SAAL1Q96ER3 474 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 SLC6A17Q9H1V8 727 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 GAREM1Q9H706 876 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 TM7SF3Q9NS93 570 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 WSB2Q9NYS7 404 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-202ENST00000396629 RBAKQ9NYW8 714 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-202ENST00000396629 ASXL3Q9C0F0 2248 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 PRRT4C9JH25 899 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 ATXN7O15265 892 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-202ENST00000396629 FLRT2O43155 660 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 PDGFRBP09619 1106 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 GARTP22102 1010 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 UBA7P41226 1012 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 KCNA1Q09470 495 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 MYO1EQ12965 1108 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 ANO4Q32M45 955 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 IL27RAQ6UWB1 636 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 CHPFQ8IZ52 775 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 PDCD7Q8N8D1 485 aaKnown RBP8.97□□□□□ -0.97
SCFD1-202ENST00000396629 LSM14AQ8ND56 463 aaKnown RBP8.97□□□□□ -0.97
SCFD1-202ENST00000396629 CADM4Q8NFZ8 388 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 WBP2Q969T9 261 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 HPDLQ96IR7 371 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 ZSCAN31Q96LW9 406 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-202ENST00000396629 MTMR12Q9C0I1 747 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 TMEM30AQ9NV96 361 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 USP36Q9P275 1121 aaKnown RBP8.97□□□□□ -0.97
SCFD1-202ENST00000396629 SH3BP1Q9Y3L3 701 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 NME7Q9Y5B8 376 aa8.97□□□□□ -0.97
SCFD1-202ENST00000396629 GOLGA4Q13439 2230 aaKnown RBP8.97□□□□□ -0.97
SCFD1-202ENST00000396629 MEI4A8MW99 385 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 CACNG3O60359 315 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 RTN3O95197 1032 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-202ENST00000396629 FAM163BP0C2L3 166 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 TMEM191BP0C7N4 346 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 NCAM1P13591 858 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 PLA2G2AP14555 144 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 YWHAQP27348 245 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 ABCG1P45844 678 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 CACNA2D1P54289 1103 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 SMAD1Q15797 465 aaKnown RBP8.96□□□□□ -0.98
SCFD1-202ENST00000396629 HLA-BQ31612 363 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 MDH1BQ5I0G3 518 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 HECTD3Q5T447 861 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 L1TD1Q5T7N2 865 aaKnown RBP8.96□□□□□ -0.98
SCFD1-202ENST00000396629 SFR1Q86XK3 245 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 NUP93Q8N1F7 819 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 ZCCHC9Q8N567 271 aaKnown RBP8.96□□□□□ -0.98
SCFD1-202ENST00000396629 SPRYD3Q8NCJ5 442 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 RHBDD1Q8TEB9 315 aa8.96□□□□□ -0.98
SCFD1-202ENST00000396629 LARP4BQ92615 738 aaKnown RBP8.96□□□□□ -0.98
SCFD1-202ENST00000396629 TOE1Q96GM8 510 aaKnown RBP8.96□□□□□ -0.98
SCFD1-202ENST00000396629 ANKRD36BP1Q96IX9 119 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms