RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ROBO3Q96MS0 1386 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 OTOP1Q7RTM1 612 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 PHC3Q8NDX5 983 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 ZNF473Q8WTR7 871 aaKnown RBP16.16■□□□□ 0.18
GNE-202ENST00000396594 JADE3Q92613 823 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 SLC39A8Q9C0K1 460 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 WDR41Q9HAD4 459 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 ABI2Q9NYB9 513 aaPredicted RBP16.16■□□□□ 0.18
GNE-202ENST00000396594 MGAT5Q09328 741 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 ZRANB3Q5FWF4 1079 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 ANKMY2Q8IV38 441 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 CLPBQ9H078 707 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 SCN3BQ9NY72 215 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 DCTN4Q9UJW0 460 aa16.16■□□□□ 0.18
GNE-202ENST00000396594 A0A1B0GW55 424 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 UBE2Q2LH0YL09 131 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 TRDMT1O14717 391 aaKnown RBP16.15■□□□□ 0.18
GNE-202ENST00000396594 DUX4L2P0CJ85 424 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 DUX4L3P0CJ86 424 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 DUX4L4P0CJ87 422 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 DUX4L5P0CJ88 424 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 DUX4L6P0CJ89 424 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 DUX4L7P0CJ90 424 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 SARSP49591 514 aaKnown RBP16.15■□□□□ 0.18
GNE-202ENST00000396594 SF3A3Q12874 501 aaKnown RBP eCLIP16.15■□□□□ 0.18
GNE-202ENST00000396594 FLOT2Q14254 428 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 LENG9Q96B70 501 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 NSL1Q96IY1 281 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 WWOXQ9NZC7 414 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 DUX4Q9UBX2 424 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 CCDC195A0A1B0GUA6 201 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 APOA1P02647 267 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 PRMT2P55345 433 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 NFIL3Q16649 462 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 CATSPERGQ6ZRH7 1159 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 NKX2-3Q8TAU0 364 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 HSFY1Q96LI6 401 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 USP18Q9UMW8 372 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 CLCA2Q9UQC9 943 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 CHMP2BQ9UQN3 213 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 ZNF510Q9Y2H8 683 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 DUOX1Q9NRD9 1551 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 ARIH2O95376 493 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 HTR7P34969 479 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 CSTF3Q12996 717 aaKnown RBP16.15■□□□□ 0.18
GNE-202ENST00000396594 KHDRBS2Q5VWX1 349 aaKnown RBP16.15■□□□□ 0.18
GNE-202ENST00000396594 LYPLAL1Q5VWZ2 237 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 ZNF544Q6NX49 715 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 FAM172AQ8WUF8 416 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 NLNQ9BYT8 704 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 IFT172Q9UG01 1749 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 AFF4Q9UHB7 1163 aaKnown RBP16.15■□□□□ 0.18
GNE-202ENST00000396594 TNFSF13BQ9Y275 285 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 AK9Q5TCS8 1911 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 POLR2LP62875 67 aaKnown RBP16.15■□□□□ 0.18
GNE-202ENST00000396594 ERVK-9P63128 1117 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 ERVK-24P63145 666 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 CDH17Q12864 832 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.15■□□□□ 0.18
GNE-202ENST00000396594 CASP10Q92851 521 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 ZKSCAN4Q969J2 545 aaPredicted RBP16.15■□□□□ 0.18
GNE-202ENST00000396594 HMX1Q9NP08 348 aaPredicted RBP16.15■□□□□ 0.18
GNE-202ENST00000396594 ENTPD7Q9NQZ7 604 aa16.15■□□□□ 0.18
GNE-202ENST00000396594 SRRM3A6NNA2 597 aaPredicted RBP16.14■□□□□ 0.17
GNE-202ENST00000396594 DEAF1O75398 565 aaPredicted RBP16.14■□□□□ 0.17
GNE-202ENST00000396594 STARD3Q14849 445 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 KYNUQ16719 465 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 TRIM48Q8IWZ4 208 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 ANKRD7Q92527 254 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 TMEM237Q96Q45 408 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 TSC22D3Q99576 134 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 VPS51Q9UID3 782 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 CASZ1Q86V15 1759 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 FAM170AA1A519 330 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 FOXN3O00409 490 aaPredicted RBP16.14■□□□□ 0.17
GNE-202ENST00000396594 OVOS1Q6IE37 1185 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 UBA3Q8TBC4 463 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 PCMTD2Q9NV79 361 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 KRT87PA6NCN2 255 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 DDTLA6NHG4 134 aaPredicted RBP16.14■□□□□ 0.17
GNE-202ENST00000396594 PFDN1O60925 122 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 CYP4Z1Q86W10 505 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 CBWD2Q8IUF1 395 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 MAGEC3Q8TD91 643 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 YME1L1Q96TA2 773 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 TRIM51Q9BSJ1 452 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 THAP2Q9H0W7 228 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 PORCNQ9H237 461 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 PRKCIP41743 596 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 RPAINQ86UA6 219 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 C12orf56Q8IXR9 622 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 PANX3Q96QZ0 392 aa16.14■□□□□ 0.17
GNE-202ENST00000396594 WARS2Q9UGM6 360 aaKnown RBP16.14■□□□□ 0.17
GNE-202ENST00000396594 CNTNAP2Q9UHC6 1331 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 ESYT3A0FGR9 886 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 KPNA5O15131 536 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 CHRM3P20309 590 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 MAPK9P45984 424 aa16.13■□□□□ 0.17
GNE-202ENST00000396594 VCPP55072 806 aaKnown RBP16.13■□□□□ 0.17
GNE-202ENST00000396594 PTENP60484 403 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms