RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ADCY2Q08462 1091 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 SMARCB1Q12824 385 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 GLE1Q53GS7 698 aaKnown RBP13.3□□□□□ -0.28
TRIM39-204ENST00000396548 RASIP1Q5U651 963 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 SYPL2Q5VXT5 272 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 FAM117BQ6P1L5 589 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 BEND5Q7L4P6 421 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 STRADAQ7RTN6 431 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 DDX53Q86TM3 631 aaKnown RBP13.3□□□□□ -0.28
TRIM39-204ENST00000396548 C7orf61Q8IZ16 206 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 DEFB106AQ8N104 65 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 SIX6OS1Q8N1H7 587 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 FAM172AQ8WUF8 416 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 CLP1Q92989 425 aaKnown RBP13.3□□□□□ -0.28
TRIM39-204ENST00000396548 ZNF558Q96NG5 402 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 PARD6BQ9BYG5 372 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 POPDC2Q9HBU9 364 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 PCDHB5Q9Y5E4 795 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 FAM92AA1XBS5 289 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 ZRANB2O95218 330 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRIM39-204ENST00000396548 KRT7P08729 469 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 BTG3Q14201 252 aaPredicted RBP13.3□□□□□ -0.28
TRIM39-204ENST00000396548 WDR93Q6P2C0 686 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 MFSD7Q6UXD7 560 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 SCAMP5Q8TAC9 235 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 C2orf15Q8WU43 125 aaKnown RBP13.3□□□□□ -0.28
TRIM39-204ENST00000396548 PGAP3Q96FM1 320 aaPredicted RBP13.3□□□□□ -0.28
TRIM39-204ENST00000396548 TBCBQ99426 244 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 NOS2P35228 1153 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 GPR15P49685 360 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 SLC5A3P53794 718 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 PITX1P78337 314 aaPredicted RBP13.3□□□□□ -0.28
TRIM39-204ENST00000396548 SPOCD1Q6ZMY3 1216 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 TEKT4Q8WW24 435 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 RBM41Q96IZ5 413 aaKnown RBP13.3□□□□□ -0.28
TRIM39-204ENST00000396548 CLSTN3Q9BQT9 956 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 KLHL11Q9NVR0 708 aa13.3□□□□□ -0.28
TRIM39-204ENST00000396548 hCG_1818297A0A087WSY0 165 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 CARNS1A5YM72 827 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 LILRB3O75022 631 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 RNF8O76064 485 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 RHOXF2BP0C7M4 288 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 RALAP11233 206 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 KDELR1P24390 212 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 PGFP49763 221 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 ATXN1P54253 815 aaKnown RBP13.29□□□□□ -0.28
TRIM39-204ENST00000396548 PPP2R5EQ16537 467 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 TTC27Q6P3X3 843 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 ACSF2Q96CM8 615 aaPredicted RBP13.29□□□□□ -0.28
TRIM39-204ENST00000396548 KRT12Q99456 494 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 RHOXF2Q9BQY4 288 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 ABI2Q9NYB9 513 aaPredicted RBP13.29□□□□□ -0.28
TRIM39-204ENST00000396548 NAALADL1Q9UQQ1 740 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 EFR3BQ9Y2G0 817 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 WDR27A2RRH5 827 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 TRIM66O15016 1216 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 HAPLN1P10915 354 aaPredicted RBP13.29□□□□□ -0.28
TRIM39-204ENST00000396548 ATP11AP98196 1134 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 HADHQ16836 314 aaKnown RBP13.29□□□□□ -0.28
TRIM39-204ENST00000396548 SMTNL2Q2TAL5 461 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 KCNT1Q5JUK3 1230 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
TRIM39-204ENST00000396548 ATAD1Q8NBU5 361 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 SPATA17Q96L03 361 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 OSBPL8Q9BZF1 889 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 LRRC19Q9H756 370 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 ZWILCHQ9H900 591 aa13.29□□□□□ -0.28
TRIM39-204ENST00000396548 DMGDHQ9UI17 866 aaKnown RBP13.29□□□□□ -0.28
TRIM39-204ENST00000396548 PI4K2BG5E9Z4 385 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 MDM4O15151 490 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 SART1O43290 800 aaKnown RBP13.28□□□□□ -0.28
TRIM39-204ENST00000396548 ABLIM3O94929 683 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 IGLV3-25P01717 112 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 KRT1P04264 644 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 CD48P09326 243 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 IL4RP24394 825 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 GRIK1P39086 918 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 PTGIRP43119 386 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 SCD5Q86SK9 330 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 GPR65Q8IYL9 337 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 SPPL2BQ8TCT7 592 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 RUBCNQ92622 972 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 RNF25Q96BH1 459 aaPredicted RBP13.28□□□□□ -0.28
TRIM39-204ENST00000396548 NCAPGQ9BPX3 1015 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 PLVAPQ9BX97 442 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 SLITRK6Q9H5Y7 841 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRIM39-204ENST00000396548 SPG21Q9NZD8 308 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 PRKAG2Q9UGJ0 569 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 PCSK1NQ9UHG2 260 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 GBF1Q92538 1859 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 RAD51CO43502 376 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 PHF2O75151 1096 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 LTFP02788 710 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 PSMD5Q16401 504 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 DDR2Q16832 855 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 TFDP3Q5H9I0 405 aa13.28□□□□□ -0.28
TRIM39-204ENST00000396548 ADAT2Q7Z6V5 191 aaKnown RBP13.28□□□□□ -0.28
TRIM39-204ENST00000396548 VSIG1Q86XK7 387 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms