RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 VWA5B1Q5TIE3 1220 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 PLEKHA7Q6IQ23 1121 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 DHDDSQ86SQ9 333 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 HPS6Q86YV9 775 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 MZB1Q8WU39 189 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 OLFM3Q96PB7 478 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 GRIP2Q9C0E4 1043 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 S100A14Q9HCY8 104 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 RAB6BQ9NRW1 208 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 NUB1Q9Y5A7 615 aa10.23□□□□□ -0.77
TRIM39-203ENST00000396547 TMEM191CA6NGB0 347 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 MAGEC1O60732 1142 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 TMEM191BP0C7N4 346 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 KCNA4P22459 653 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 RFC1P35251 1148 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 GMPRP36959 345 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 ETV4P43268 484 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 APLP1P51693 650 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 RPL10AP62906 217 aaKnown RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 STX3Q13277 289 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 LSAMPQ13449 338 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 TTLL12Q14166 644 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 ACAP1Q15027 740 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 ATG16L1Q676U5 607 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 C12orf56Q8IXR9 622 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 GALNT4Q8N4A0 578 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 NAT8LQ8N9F0 302 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 SPATA18Q8TC71 538 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 CNBD2Q96M20 576 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 KLHL4Q9C0H6 718 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 PIH1D1Q9NWS0 290 aaKnown RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 HEY1Q9Y5J3 304 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 ITGAVP06756 1048 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 PTP4A2Q12974 167 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 DNAL1Q4LDG9 190 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 BSPRYQ5W0U4 402 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 GPAT2Q6NUI2 795 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 RNF111Q6ZNA4 994 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 PCGF5Q86SE9 256 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 DEFB107AQ8IZN7 70 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 RNF148Q8N7C7 305 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 PRPF31Q8WWY3 499 aaKnown RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 RIT2Q99578 217 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 TCHPQ9BT92 498 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 GLIS2Q9BZE0 524 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 ACSS2Q9NR19 701 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 PCDHGB4Q9UN71 923 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 DRG1Q9Y295 367 aaKnown RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 DNAJC16Q9Y2G8 782 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 TELO2Q9Y4R8 837 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 PCDHGB5Q9Y5G0 923 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 COMMD3-BMI1R4GMX3 469 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 ASTN2O75129 1339 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 A0A088AWK7 358 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 A0A0B4J269 797 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 STAM2O75886 525 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 APRTP07741 180 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 IL1R2P27930 398 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 CRABP2P29373 138 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 GMPSP49915 693 aaPredicted RBP10.22□□□□□ -0.77
TRIM39-203ENST00000396547 FOLH1Q04609 750 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 DPYSL3Q14195 570 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 CDO1Q16878 200 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 TKFCQ3LXA3 575 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 ICA1LQ8NDH6 482 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 OR5B17Q8NGF7 314 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 MFSD14AQ96MC6 490 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 MAN1C1Q9NR34 630 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 KCNK4Q9NYG8 393 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 SOX13Q9UN79 622 aa10.22□□□□□ -0.77
TRIM39-203ENST00000396547 SPDYE16A6NNV3 312 aaPredicted RBP10.21□□□□□ -0.77
TRIM39-203ENST00000396547 F8W8V4 182 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 CFLARO15519 480 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 ITM2AO43736 263 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 ADCY3O60266 1144 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 KRT37O76014 449 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 UQCRBP14927 111 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 MSLNQ13421 630 aaPredicted RBP10.21□□□□□ -0.77
TRIM39-203ENST00000396547 MYBPC3Q14896 1274 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 SPDYAQ5MJ70 313 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 ENOSF1Q7L5Y1 443 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 ZBTB33Q86T24 672 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 PDSS2Q86YH6 399 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRIM39-203ENST00000396547 GMCL1P1Q8NEA9 526 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 JOSD2Q8TAC2 188 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 TMC2Q8TDI7 906 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 FAM172AQ8WUF8 416 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 TMEM143Q96AN5 459 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 DTNBP1Q96EV8 351 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 DDX43Q9NXZ2 648 aaKnown RBP10.21□□□□□ -0.77
TRIM39-203ENST00000396547 TMOD2Q9NZR1 351 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 GABBR1Q9UBS5 961 aa10.21□□□□□ -0.77
TRIM39-203ENST00000396547 ZC3H7BQ9UGR2 993 aaKnown RBP10.21□□□□□ -0.77
TRIM39-203ENST00000396547 FARP1Q9Y4F1 1045 aaPredicted RBP10.21□□□□□ -0.77
TRIM39-203ENST00000396547 LRRIQ4A6NIV6 560 aa10.21□□□□□ -0.78
TRIM39-203ENST00000396547 CAPN14A8MX76 684 aa10.21□□□□□ -0.78
TRIM39-203ENST00000396547 MCF2LO15068 1137 aa10.21□□□□□ -0.78
TRIM39-203ENST00000396547 MAGEB3O15480 346 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms