RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 AGPAT3Q9NRZ7 376 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 GON4LQ3T8J9 2241 aa18.57■□□□□ 0.56
EXOSC3-202ENST00000396521 ASPMQ8IZT6 3477 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 A0A1W2PQD8 194 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 HOXB2P14652 356 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 TRIM21P19474 475 aaKnown RBP18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 SPINK2P20155 84 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 ITPKAP23677 461 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 HOXD13P35453 343 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 CEBPZQ03701 1054 aaKnown RBP18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 KDSRQ06136 332 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 GOLGA8FQ08AF8 430 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 GOLGA8DPQ0D2H9 430 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 FAM26FQ5R3K3 315 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 HTR3DQ70Z44 454 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 ARMCX6Q7L4S7 300 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 PDILTQ8N807 584 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 IQUBQ8NA54 791 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 ZCCHC14Q8WYQ9 949 aaKnown RBP18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 CCDC127Q96BQ5 260 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 SMARCD1Q96GM5 515 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 XPO6Q96QU8 1125 aaKnown RBP18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 FBXO44Q9H4M3 255 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 CAPN10Q9HC96 672 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 WDR35Q9P2L0 1181 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 SUSD2Q9UGT4 822 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 CHORDC1Q9UHD1 332 aaPredicted RBP18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 PCNX2A6NKB5 2137 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 PKD1L2Q7Z442 2459 aa18.56■□□□□ 0.56
EXOSC3-202ENST00000396521 ASCC3Q8N3C0 2202 aaKnown RBP18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 A0A087X0B3 334 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 SRRM3A6NNA2 597 aaPredicted RBP18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 ARHGAP33O14559 1287 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 TGFB1I1O43294 461 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 PHACTR2O75167 634 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 ZDHHC11BP0C7U3 371 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 P4HA1P13674 534 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 SYT1P21579 422 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 CACNA2D1P54289 1103 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 ZNF33AQ06730 810 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 IFRD2Q12894 506 aaPredicted RBP18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 E2F5Q15329 346 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 ANO4Q32M45 955 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 C10orf76Q5T2E6 689 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 SYCP2LQ5T4T6 812 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 GRAMD4Q6IC98 578 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 SFTPA1Q8IWL2 248 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 C12orf56Q8IXR9 622 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 RDH13Q8NBN7 331 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 GOLGA5Q8TBA6 731 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 FOXJ1Q92949 421 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 XYLT2Q9H1B5 865 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 MAGEF1Q9HAY2 307 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 TMEM30AQ9NV96 361 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 NXF1Q9UBU9 619 aaKnown RBP18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 NME7Q9Y5B8 376 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 KIAA1549LQ6ZVL6 1849 aa18.55■□□□□ 0.56
EXOSC3-202ENST00000396521 ANTXRLA6NF34 631 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 GFRA2O00451 464 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 CLDN5O00501 218 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 GABRG2P18507 467 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 NASPP49321 788 aaPredicted RBP18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 ZNF132P52740 706 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 SLC5A3P53794 718 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 ASIC1P78348 528 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 BBS7Q8IWZ6 715 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 FRMD1Q8N878 549 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 NAT16Q8N8M0 369 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 USP28Q96RU2 1077 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 MED10Q9BTT4 135 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 GTPBP2Q9BX10 602 aaKnown RBP18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 ZDHHC5Q9C0B5 715 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 DPEP3Q9H4B8 488 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 TLR8Q9NR97 1041 aaKnown RBP18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 DNAAF2Q9NVR5 837 aaKnown RBP18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 CALCOCO1Q9P1Z2 691 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 LSM7Q9UK45 103 aaKnown RBP18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 CACNA1EQ15878 2313 aa18.54■□□□□ 0.56
EXOSC3-202ENST00000396521 BAHCC1Q9P281 2608 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 HELZP42694 1942 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 SCAMP3O14828 347 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 HYAL3O43820 417 aaPredicted RBP18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 CACNG3O60359 315 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 PPP6R2O75170 966 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 TOP3BO95985 862 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 GNSP15586 552 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 CYP2J2P51589 502 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 MYL6P60660 151 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 E2F4Q16254 413 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 ZNF667Q5HYK9 610 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 FAM35AQ86V20 835 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 TMEM25Q86YD3 366 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 CHPFQ8IZ52 775 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 GLIS3Q8NEA6 775 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 SCAMP5Q8TAC9 235 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 INTS4Q96HW7 963 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 KCNK16Q96T55 309 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 C7orf25Q9BPX7 421 aa18.53■□□□□ 0.56
EXOSC3-202ENST00000396521 MARK1Q9P0L2 795 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms