RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 SNRNP25Q9BV90 132 aaKnown RBP12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 CCDC134Q9H6E4 229 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 NRCAMQ92823 1304 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 KPNA7A9QM74 516 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 NEBLO76041 1014 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 CYP2F1P24903 491 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 GJA5P36382 358 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 PNPLA4P41247 253 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 EFTUD2Q15029 972 aaKnown RBP eCLIP12.03□□□□□ -0.487e-7■■■■□ 23
PDXDC1-202ENST00000396410 BZW1Q7L1Q6 419 aaKnown RBP12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 RELL1Q8IUW5 271 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 CMASQ8NFW8 434 aaPredicted RBP12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 LRRN4Q8WUT4 740 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 AP4E1Q9UPM8 1137 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 A0A1W2PPM1 405 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 TCRBV5S1A1TA0A578 114 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 CFAP73A6NFT4 308 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 KBTBD13C9JR72 458 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 MFSD10Q14728 455 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 NOMO1Q15155 1222 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 TLK2Q86UE8 772 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 ZDHHC17Q8IUH5 632 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 CCDC110Q8TBZ0 833 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 ALKBH8Q96BT7 664 aaKnown RBP12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 TXLNGQ9NUQ3 528 aa12.03□□□□□ -0.48
PDXDC1-202ENST00000396410 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.03□□□□□ -0.482e-7■□□□□ 10.4
PDXDC1-202ENST00000396410 SPAG6O75602 509 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 DCTN3O75935 186 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 SNAI1O95863 264 aaPredicted RBP12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 GSTA1P08263 222 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 RARBP10826 455 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 SLC20A2Q08357 652 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 AP1B1Q10567 949 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 CCDC14Q49A88 953 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 DCAF6Q58WW2 860 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 UNC93AQ86WB7 457 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 DEPDC1BQ8WUY9 529 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 DCTN4Q9UJW0 460 aa12.02□□□□□ -0.48
PDXDC1-202ENST00000396410 GABRB2P47870 512 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 NRLP54845 237 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 GAD2Q05329 585 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 E2F5Q15329 346 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 EFHC1Q5JVL4 640 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 ZNF449Q6P9G9 518 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 DSTYKQ6XUX3 929 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 ADGRF2Q8IZF7 708 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 GIMAP7Q8NHV1 300 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC2A14Q8TDB8 520 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 RAB3IPQ96QF0 476 aaPredicted RBP12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 VRTNQ9H8Y1 702 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 STAP1Q9ULZ2 295 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 A0A0G2JND7 137 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 PPEF2O14830 753 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 CPT1AP50416 773 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 ANKRD20A3Q5VUR7 823 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 ARFGAP1Q8N6T3 406 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 DERAQ9Y315 318 aa12.02□□□□□ -0.49
PDXDC1-202ENST00000396410 GLTPD2A6NH11 291 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 CHUKO15111 745 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC8A1P32418 973 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 RASSF2P50749 326 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 INCA1Q0VD86 236 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 MTFR1Q15390 333 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 FAM182AQ5T1J6 154 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 C9orf57Q5W0N0 161 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 RSPH3Q86UC2 560 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 FAM131BQ86XD5 332 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 LRRC52Q8N7C0 313 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 LPIN3Q9BQK8 851 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 USH1CQ9Y6N9 552 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 C17orf102A2RUQ5 167 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 TP73O15350 636 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 TAF1CQ15572 869 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 LACTB2Q53H82 288 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 PDZD4Q76G19 769 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 ANKRD23Q86SG2 305 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 KIF2BQ8N4N8 673 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 BRI3BPQ8WY22 251 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 CDKL2Q92772 493 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 PIWIL1Q96J94 861 aaKnown RBP12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 SNX27Q96L92 541 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 PEBP4Q96S96 227 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 DPEP3Q9H4B8 488 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 ACSS3Q9H6R3 686 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 ETNK1Q9HBU6 452 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 PCDH18Q9HCL0 1135 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 NPHS2Q9NP85 383 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 TCRBV7S3A2A0A539 114 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 AVILO75366 819 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 KRT38O76015 456 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 NAT8LQ8N9F0 302 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 ERP27Q96DN0 273 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 KATNAL1Q9BW62 490 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 FRMD8Q9BZ67 464 aaPredicted RBP12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC13A1Q9BZW2 595 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 TMEM51Q9NW97 253 aa12.01□□□□□ -0.49
PDXDC1-202ENST00000396410 DNAJC8O75937 253 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms