RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 KCTD16Q68DU8 428 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 DCLRE1AQ6PJP8 1040 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SLC26A9Q7LBE3 791 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 EFL1Q7Z2Z2 1120 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 TBC1D1Q86TI0 1168 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 NOA1Q8NC60 698 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 XPNPEP1Q9NQW7 623 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 INPP5FQ9Y2H2 1132 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PCDHB12Q9Y5F1 795 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 WNT7AO00755 349 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SRGAP2O75044 1071 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 H2AFYO75367 372 aaKnown RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 KRT16P08779 473 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 COILP38432 576 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 GGCXP38435 758 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PRKAA2P54646 552 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 LILRA4P59901 499 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 KCNA1Q09470 495 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 PTGISQ16647 500 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 ARHGAP17Q68EM7 881 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SETD3Q86TU7 594 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 NKD2Q969F2 451 aaPredicted RBP3.52□□□□□ -1.85
VPS13C-203ENST00000395896 GDAP1L1Q96MZ0 367 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 GDAP2Q9NXN4 497 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 CPA4Q9UI42 421 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 SCN10AQ9Y5Y9 1956 aa3.52□□□□□ -1.85
VPS13C-203ENST00000395896 KCNN4O15554 427 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PYGLP06737 847 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF286BP0CG31 522 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RWDD4Q6NW29 188 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RAPH1Q70E73 1250 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PID1Q7Z2X4 250 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ADAT2Q7Z6V5 191 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZBED8Q8IZ13 594 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RASGEF1CQ8N431 466 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FBXO25Q8TCJ0 367 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ACMSDQ8TDX5 336 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 STXBP5LQ9Y2K9 1186 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 LTBP1Q14766 1721 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 BRCA1P38398 1863 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SLC9A3R1O14745 358 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 KIF3CO14782 793 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CILPO75339 1184 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 VTNP04004 478 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 GNGT1P63211 74 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 NOMO3P69849 1222 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 MAMLD1Q13495 774 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF235Q14590 738 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ECM1Q16610 540 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 DBN1Q16643 649 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 MRNIPQ6NTE8 343 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CXCL17Q6UXB2 119 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 C3orf62Q6ZUJ4 267 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 DENND5BQ6ZUT9 1274 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ANKS3Q6ZW76 656 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SAPCD2Q86UD0 394 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 MON1AQ86VX9 555 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF526Q8TF50 670 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SERPINI1Q99574 410 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 EFHD1Q9BUP0 239 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SDR42E2A6NKP2 422 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CFAP99D6REC4 459 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 TYK2P29597 1187 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF200P98182 395 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FSCBQ5H9T9 825 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 INTS6LQ5JSJ4 861 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ERMARDQ5T6L9 678 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 UGT3A1Q6NUS8 523 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 DDX42Q86XP3 938 aaKnown RBP eCLIP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 IFNL1Q8IU54 200 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 B3GALNT2Q8NCR0 500 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SP110Q9HB58 689 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 BTBD7Q9P203 1132 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZC3H7BQ9UGR2 993 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 TNS1Q9HBL0 1735 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 H3BQF6 201 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 FKTNO75072 461 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF623O75123 536 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SERPINF2P08697 491 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RALBP11234 206 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 GRK2P25098 689 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 DYNLT1P63172 113 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 POLD3Q15054 466 aaPredicted RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 POTEHQ6S545 545 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 KIAA0408Q6ZU52 694 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CCDC149Q6ZUS6 474 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 ADGRE3Q9BY15 652 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CFAP73A6NFT4 308 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SMIM23A6NLE4 172 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PRRG1O14668 218 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CYP1A2P05177 515 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SNRPAP09012 282 aaKnown RBP3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SPTBP11277 2137 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 RAG1P15918 1043 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 OR1G1P47890 313 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 SLC7A5Q01650 507 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 CDH17Q12864 832 aa3.51□□□□□ -1.85
VPS13C-203ENST00000395896 PKN2Q16513 984 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms