RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 CAMKK1Q8N5S9 505 aa17.1■□□□□ 0.33
CXCL12-206ENST00000395795 GAB3Q8WWW8 586 aa17.1■□□□□ 0.33
CXCL12-206ENST00000395795 TIGD1Q96MW7 591 aa17.1■□□□□ 0.33
CXCL12-206ENST00000395795 USP3Q9Y6I4 520 aa17.1■□□□□ 0.33
CXCL12-206ENST00000395795 TLR5O60602 858 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 FAM200BP0CF97 657 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 KIR2DL1P43626 348 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-206ENST00000395795 MXI1P50539 228 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 KIF11P52732 1056 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 RAD23BP54727 409 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 NUCB2P80303 420 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 NR1H3Q13133 447 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 DMC1Q14565 340 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 LY6G5CQ5SRR4 150 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 PPP1R26Q5T8A7 1209 aaPredicted RBP17.09■□□□□ 0.33
CXCL12-206ENST00000395795 KBTBD6Q86V97 674 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 GPR161Q8N6U8 529 aaKnown RBP17.09■□□□□ 0.33
CXCL12-206ENST00000395795 UBR7Q8N806 425 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 SLC4A11Q8NBS3 891 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 FBXL13Q8NEE6 735 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 FAXDC2Q96IV6 333 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 PNPLA8Q9NP80 782 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 RAB20Q9NX57 234 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 EBF1Q9UH73 591 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 GMEB2Q9UKD1 530 aa17.09■□□□□ 0.33
CXCL12-206ENST00000395795 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.09■□□□□ 0.33
CXCL12-206ENST00000395795 MED19A0JLT2 244 aaPredicted RBP17.08■□□□□ 0.32
CXCL12-206ENST00000395795 SLC9A3R1O14745 358 aaPredicted RBP17.08■□□□□ 0.32
CXCL12-206ENST00000395795 CETN3O15182 167 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 FOXK2Q01167 660 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 PUM1Q14671 1186 aaKnown RBP eCLIP17.08■□□□□ 0.32
CXCL12-206ENST00000395795 EMC10Q5UCC4 262 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 DDX42Q86XP3 938 aaKnown RBP eCLIP17.08■□□□□ 0.32
CXCL12-206ENST00000395795 ELOA2Q8IYF1 753 aaPredicted RBP17.08■□□□□ 0.32
CXCL12-206ENST00000395795 SLC35C1Q96A29 364 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 DUSP16Q9BY84 665 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 FBXO44Q9H4M3 255 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 CISHQ9NSE2 258 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 SEMA4GQ9NTN9 838 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
CXCL12-206ENST00000395795 SLC8A2Q9UPR5 921 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 SPAG17Q6Q759 2223 aa17.08■□□□□ 0.32
CXCL12-206ENST00000395795 A0A1W2PQH9 124 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 MDM4O15151 490 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 SLC16A3O15427 465 aaKnown RBP17.07■□□□□ 0.32
CXCL12-206ENST00000395795 HOXC11O43248 304 aaPredicted RBP17.07■□□□□ 0.32
CXCL12-206ENST00000395795 LRP3O75074 770 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 RPP40O75818 363 aaKnown RBP17.07■□□□□ 0.32
CXCL12-206ENST00000395795 CLSTN1O94985 981 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 EIF2DP41214 584 aaKnown RBP17.07■□□□□ 0.32
CXCL12-206ENST00000395795 ATXN1P54253 815 aaKnown RBP17.07■□□□□ 0.32
CXCL12-206ENST00000395795 ZNF394Q53GI3 561 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 TMEM92Q6UXU6 159 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 HTR3DQ70Z44 454 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 RASSF3Q86WH2 238 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 TMEM25Q86YD3 366 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 JAKMIP2Q96AA8 810 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 OTUB2Q96DC9 234 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 ZC3H10Q96K80 434 aaKnown RBP17.07■□□□□ 0.32
CXCL12-206ENST00000395795 IMPG2Q9BZV3 1241 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 TBC1D14Q9P2M4 693 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 NUDT5Q9UKK9 219 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 MAN1B1Q9UKM7 699 aa17.07■□□□□ 0.32
CXCL12-206ENST00000395795 MYH10P35580 1976 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 DCLK1O15075 740 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 TRIM24O15164 1050 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 AXIN1O15169 862 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 ADAM23O75077 832 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 GADD45BO75293 160 aaPredicted RBP17.06■□□□□ 0.32
CXCL12-206ENST00000395795 KAT7O95251 611 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 EPB41P11171 864 aaKnown RBP17.06■□□□□ 0.32
CXCL12-206ENST00000395795 ADH5P11766 374 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 ACO1P21399 889 aaKnown RBP17.06■□□□□ 0.32
CXCL12-206ENST00000395795 SEC13P55735 322 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 FKBP3Q00688 224 aaKnown RBP17.06■□□□□ 0.32
CXCL12-206ENST00000395795 LMNB2Q03252 620 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 BECN1Q14457 450 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 CSRP2Q16527 193 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 PLK5Q496M5 336 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 C2orf27AQ580R0 203 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 RAB41Q5JT25 222 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 ARHGAP17Q68EM7 881 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 KLHDC10Q6PID8 442 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 Q6ZNB5 142 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 BHLHA9Q7RTU4 235 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 CCDC186Q7Z3E2 898 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 ZNF276Q8N554 614 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 IL17RCQ8NAC3 791 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 SECISBP2LQ93073 1101 aaKnown RBP17.06■□□□□ 0.32
CXCL12-206ENST00000395795 PNKPQ96T60 521 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 DUSP15Q9H1R2 295 aaPredicted RBP17.06■□□□□ 0.32
CXCL12-206ENST00000395795 TLR8Q9NR97 1041 aaKnown RBP17.06■□□□□ 0.32
CXCL12-206ENST00000395795 RAB23Q9ULC3 237 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 MMP17Q9ULZ9 603 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 USP18Q9UMW8 372 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 NCOR2Q9Y618 2525 aa17.06■□□□□ 0.32
CXCL12-206ENST00000395795 PPP1R3GB7ZBB8 358 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 SGK1O00141 431 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms