RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 TRANK1O15050 2925 aa25.68■■□□□ 1.7
CTF1-202ENST00000395019 ATG2AQ2TAZ0 1938 aa25.68■■□□□ 1.7
CTF1-202ENST00000395019 HSF2BPO75031 334 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 ERLIN1O75477 346 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 HEXIM1O94992 359 aaKnown RBP25.67■■□□□ 1.7
CTF1-202ENST00000395019 GLI1P08151 1106 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 LAG3P18627 525 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 BDNFP23560 247 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 TKTL1P51854 596 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 CDR1P51861 262 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 ELAVL2Q12926 359 aaKnown RBP25.67■■□□□ 1.7
CTF1-202ENST00000395019 MRPL58Q14197 206 aaKnown RBP25.67■■□□□ 1.7
CTF1-202ENST00000395019 VARS2Q5ST30 1063 aaKnown RBP25.67■■□□□ 1.7
CTF1-202ENST00000395019 C4orf50Q6ZRC1 276 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 SLC39A11Q8N1S5 342 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 C12orf50Q8NA57 414 aaPredicted RBP25.67■■□□□ 1.7
CTF1-202ENST00000395019 ZNF558Q96NG5 402 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 HERPUD2Q9BSE4 406 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 C11orf84Q9BUA3 381 aaPredicted RBP25.67■■□□□ 1.7
CTF1-202ENST00000395019 DDX23Q9BUQ8 820 aaKnown RBP25.67■■□□□ 1.7
CTF1-202ENST00000395019 VN1R3Q9BXE9 311 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 KLHL11Q9NVR0 708 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 AMACRQ9UHK6 382 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 SF3B1O75533 1304 aaKnown RBP eCLIP25.67■■□□□ 1.79e-7■■■■■ 57.4
CTF1-202ENST00000395019 SZT2Q5T011 3432 aa25.67■■□□□ 1.7
CTF1-202ENST00000395019 ZMYND10O75800 440 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 FGFR3P22607 806 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 ALDH7A1P49419 539 aaKnown RBP25.66■■□□□ 1.7
CTF1-202ENST00000395019 KLF1Q13351 362 aaPredicted RBP25.66■■□□□ 1.7
CTF1-202ENST00000395019 ODF2Q5BJF6 829 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 SH3PXD2AQ5TCZ1 1133 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 FAM171A1Q5VUB5 890 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 FUT10Q6P4F1 479 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 TMCO3Q6UWJ1 677 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 MFSD7Q6UXD7 560 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 CCNI2Q6ZMN8 369 aaPredicted RBP25.66■■□□□ 1.7
CTF1-202ENST00000395019 SPOCD1Q6ZMY3 1216 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 ANKS1BQ7Z6G8 1248 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 DCP1BQ8IZD4 617 aaKnown RBP25.66■■□□□ 1.7
CTF1-202ENST00000395019 RAPGEF5Q92565 580 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 MAGOHBQ96A72 148 aaKnown RBP25.66■■□□□ 1.7
CTF1-202ENST00000395019 RHOBTB2Q9BYZ6 727 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 GPR62Q9BZJ7 368 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 ZWILCHQ9H900 591 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 PNPLA8Q9NP80 782 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 DMAP1Q9NPF5 467 aaPredicted RBP25.66■■□□□ 1.7
CTF1-202ENST00000395019 CNGB3Q9NQW8 809 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.66■■□□□ 1.7
CTF1-202ENST00000395019 PI4K2BG5E9Z4 385 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 DAB1O75553 588 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 TNFRSF8P28908 595 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 NDUFV1P49821 464 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 LLGL1Q15334 1064 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 SPATA2LQ8IUW3 424 aaPredicted RBP25.66■■□□□ 1.7
CTF1-202ENST00000395019 CMASQ8NFW8 434 aaPredicted RBP25.66■■□□□ 1.7
CTF1-202ENST00000395019 FAM172AQ8WUF8 416 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 CENPIQ92674 756 aaPredicted RBP25.66■■□□□ 1.7
CTF1-202ENST00000395019 RUNDC3BQ96NL0 473 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 ULBP1Q9BZM6 244 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 LRRC19Q9H756 370 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 ARFGAP3Q9NP61 516 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 GDF3Q9NR23 364 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 PCSK1NQ9UHG2 260 aa25.66■■□□□ 1.7
CTF1-202ENST00000395019 LRRD1A4D1F6 860 aa25.65■■□□□ 1.7
CTF1-202ENST00000395019 MATKP42679 507 aa25.65■■□□□ 1.7
CTF1-202ENST00000395019 ATP11AP98196 1134 aa25.65■■□□□ 1.7
CTF1-202ENST00000395019 DHX34Q14147 1143 aaKnown RBP25.65■■□□□ 1.7
CTF1-202ENST00000395019 CDO1Q16878 200 aa25.65■■□□□ 1.7
CTF1-202ENST00000395019 PRPF38BQ5VTL8 546 aaKnown RBP25.65■■□□□ 1.7
CTF1-202ENST00000395019 GPRIN1Q7Z2K8 1008 aa25.65■■□□□ 1.7
CTF1-202ENST00000395019 IFT20Q8IY31 132 aa25.65■■□□□ 1.7
CTF1-202ENST00000395019 IGSF21Q96ID5 467 aa25.65■■□□□ 1.7
CTF1-202ENST00000395019 PEBP4Q96S96 227 aa25.65■■□□□ 1.7
CTF1-202ENST00000395019 PCYOX1Q9UHG3 505 aa25.65■■□□□ 1.7
CTF1-202ENST00000395019 COL4A4P53420 1690 aaPredicted RBP25.65■■□□□ 1.7
CTF1-202ENST00000395019 OR6C75A6NL08 312 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 C3orf70A6NLC5 250 aaPredicted RBP25.64■■□□□ 1.7
CTF1-202ENST00000395019 BHMG1C9JSJ3 638 aaPredicted RBP25.64■■□□□ 1.7
CTF1-202ENST00000395019 DNAJB2P25686 324 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 CTNNB1P35222 781 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 FNTAP49354 379 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 DAOAP59103 153 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 YWHAZP63104 245 aaKnown RBP25.64■■□□□ 1.7
CTF1-202ENST00000395019 SMTNL2Q2TAL5 461 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 TFDP3Q5H9I0 405 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 CYP4V2Q6ZWL3 525 aaPredicted RBP25.64■■□□□ 1.7
CTF1-202ENST00000395019 TAS1R1Q7RTX1 841 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 NDRG1Q92597 394 aaKnown RBP25.64■■□□□ 1.7
CTF1-202ENST00000395019 ACSF2Q96CM8 615 aaPredicted RBP25.64■■□□□ 1.7
CTF1-202ENST00000395019 B3GALT6Q96L58 329 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 HEMGNQ9BXL5 484 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 CERS4Q9HA82 394 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 NGRNQ9NPE2 291 aaKnown RBP25.64■■□□□ 1.7
CTF1-202ENST00000395019 EFR3BQ9Y2G0 817 aa25.64■■□□□ 1.7
CTF1-202ENST00000395019 PRPSAP2O60256 369 aa25.63■■□□□ 1.69
CTF1-202ENST00000395019 KDELR1P24390 212 aa25.63■■□□□ 1.69
CTF1-202ENST00000395019 CDKN2BP42772 138 aa25.63■■□□□ 1.69
CTF1-202ENST00000395019 GUCY2DQ02846 1103 aa25.63■■□□□ 1.69
CTF1-202ENST00000395019 NFE2Q16621 373 aaPredicted RBP25.63■■□□□ 1.69
CTF1-202ENST00000395019 TAZQ16635 292 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms