RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 STK17AQ9UEE5 414 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 CYP8B1Q9UNU6 501 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 GOLGA4Q13439 2230 aaKnown RBP16.84■□□□□ 0.29
SNCA-205ENST00000394991 KNL1Q8NG31 2342 aa16.84■□□□□ 0.29
SNCA-205ENST00000394991 A0A1W2PQD8 194 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 CLDN5O00501 218 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 COCHO43405 550 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 PRPF6O94906 941 aaKnown RBP16.83■□□□□ 0.28
SNCA-205ENST00000394991 BMP15O95972 392 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 TNNC2P02585 160 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 NTSR1P30989 418 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 HS2ST1Q7LGA3 356 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 TRMT11Q7Z4G4 463 aaKnown RBP16.83■□□□□ 0.28
SNCA-205ENST00000394991 TMEM25Q86YD3 366 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 CBWD2Q8IUF1 395 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 KCNV2Q8TDN2 545 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 OTUB2Q96DC9 234 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 MMS19Q96T76 1030 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 SLC6A17Q9H1V8 727 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 DEC1Q9P2X7 70 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 PCDHB13Q9Y5F0 798 aa16.83■□□□□ 0.28
SNCA-205ENST00000394991 URB1O60287 2271 aaKnown RBP16.82■□□□□ 0.28
SNCA-205ENST00000394991 HELZ2Q9BYK8 2649 aaKnown RBP16.82■□□□□ 0.28
SNCA-205ENST00000394991 SYPP08247 313 aa16.82■□□□□ 0.28
SNCA-205ENST00000394991 YWHAQP27348 245 aa16.82■□□□□ 0.28
SNCA-205ENST00000394991 BTBD8Q5XKL5 378 aa16.82■□□□□ 0.28
SNCA-205ENST00000394991 CCNI2Q6ZMN8 369 aaPredicted RBP16.82■□□□□ 0.28
SNCA-205ENST00000394991 NAXDQ8IW45 347 aa16.82■□□□□ 0.28
SNCA-205ENST00000394991 IPO4Q8TEX9 1081 aaKnown RBP16.82■□□□□ 0.28
SNCA-205ENST00000394991 B3GNT5Q9BYG0 378 aa16.82■□□□□ 0.28
SNCA-205ENST00000394991 ELOVL4Q9GZR5 314 aa16.82■□□□□ 0.28
SNCA-205ENST00000394991 SPHK2Q9NRA0 654 aa16.82■□□□□ 0.28
SNCA-205ENST00000394991 STARD13Q9Y3M8 1113 aa16.82■□□□□ 0.28
SNCA-205ENST00000394991 R3HCC1Q9Y3T6 440 aaKnown RBP16.82■□□□□ 0.28
SNCA-205ENST00000394991 CABIN1Q9Y6J0 2220 aa16.82■□□□□ 0.28
SNCA-205ENST00000394991 ASXL3Q9C0F0 2248 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 FRMD3A2A2Y4 597 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 TACC1O75410 805 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 IDEP14735 1019 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 PTPN1P18031 435 aaKnown RBP16.81■□□□□ 0.28
SNCA-205ENST00000394991 GNL1P36915 607 aaPredicted RBP16.81■□□□□ 0.28
SNCA-205ENST00000394991 SLC14A1Q13336 389 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 ALCAMQ13740 583 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 DUOXA2Q1HG44 320 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 PLEKHG6Q3KR16 790 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 NUP93Q8N1F7 819 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 GLIS3Q8NEA6 775 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 OR6B3Q8NGW1 331 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 MDM1Q8TC05 714 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 FBXO32Q969P5 355 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 ZNF419Q96HQ0 510 aaPredicted RBP16.81■□□□□ 0.28
SNCA-205ENST00000394991 TMX3Q96JJ7 454 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 BBC3Q96PG8 261 aaPredicted RBP16.81■□□□□ 0.28
SNCA-205ENST00000394991 TRIM9Q9C026 710 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 SNX25Q9H3E2 840 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 CCDC86Q9H6F5 360 aaKnown RBP16.81■□□□□ 0.28
SNCA-205ENST00000394991 CCSER2Q9H7U1 834 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 SH3BP1Q9Y3L3 701 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 RAD54BQ9Y620 910 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 TMEM131Q92545 1883 aa16.81■□□□□ 0.28
SNCA-205ENST00000394991 ZNF233A6NK53 670 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 ZNF217O75362 1048 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 CST3P01034 146 aaPredicted RBP16.8■□□□□ 0.28
SNCA-205ENST00000394991 IRF1P10914 325 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 MAOBP27338 520 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 GRIK2Q13002 908 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 ANO4Q32M45 955 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 HECTD3Q5T447 861 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 RRAGBQ5VZM2 374 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 SV2BQ7L1I2 683 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 TRAPPC11Q7Z392 1133 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 SLCO6A1Q86UG4 719 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 WDR49Q8IV35 697 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 RGL4Q8IZJ4 473 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 PDZD8Q8NEN9 1154 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 SCAMP5Q8TAC9 235 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 OVCA2Q8WZ82 227 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 DUSP9Q99956 384 aaKnown RBP16.8■□□□□ 0.28
SNCA-205ENST00000394991 CCDC39Q9UFE4 941 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 CHORDC1Q9UHD1 332 aaPredicted RBP16.8■□□□□ 0.28
SNCA-205ENST00000394991 FBXO2Q9UK22 296 aaPredicted RBP16.8■□□□□ 0.28
SNCA-205ENST00000394991 PCDHB9Q9Y5E1 797 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 CKAP5Q14008 2032 aa16.8■□□□□ 0.28
SNCA-205ENST00000394991 PRRT4C9JH25 899 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 CBFA2T3O75081 653 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 RTN3O95197 1032 aaPredicted RBP16.79■□□□□ 0.28
SNCA-205ENST00000394991 CD2BP2O95400 341 aaKnown RBP16.79■□□□□ 0.28
SNCA-205ENST00000394991 PREPLQ4J6C6 727 aaPredicted RBP16.79■□□□□ 0.28
SNCA-205ENST00000394991 SNX30Q5VWJ9 437 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 GRAMD4Q6IC98 578 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 TOGARAM2Q6ZUX3 1019 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 CHPFQ8IZ52 775 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 B3GALNT2Q8NCR0 500 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 CLIC6Q96NY7 704 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 KCNK16Q96T55 309 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 GABRG3Q99928 467 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 PANK4Q9NVE7 773 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 DNAJC17Q9NVM6 304 aaKnown RBP16.79■□□□□ 0.28
SNCA-205ENST00000394991 GMIPQ9P107 970 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 CLIC4Q9Y696 253 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms