RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 LIMS2Q7Z4I7 341 aa19.41■□□□□ 0.7
SIL1-202ENST00000394817 SCUBE3Q8IX30 993 aa19.41■□□□□ 0.7
SIL1-202ENST00000394817 ANKRD52Q8NB46 1076 aa19.41■□□□□ 0.7
SIL1-202ENST00000394817 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.41■□□□□ 0.7
SIL1-202ENST00000394817 SNRNP25Q9BV90 132 aaKnown RBP19.41■□□□□ 0.7
SIL1-202ENST00000394817 ACTR5Q9H9F9 607 aaPredicted RBP19.41■□□□□ 0.7
SIL1-202ENST00000394817 PCDH18Q9HCL0 1135 aa19.41■□□□□ 0.7
SIL1-202ENST00000394817 NKIRAS1Q9NYS0 192 aa19.41■□□□□ 0.7
SIL1-202ENST00000394817 SENP1Q9P0U3 644 aa19.41■□□□□ 0.7
SIL1-202ENST00000394817 TCRBV7S3A2A0A539 114 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 KPNA7A9QM74 516 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 POC1B-GALNT4F8VUJ3 575 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 MYL3P08590 195 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 PHBP35232 272 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 PTPN9P43378 593 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 ACTN3Q08043 901 aaPredicted RBP19.4■□□□□ 0.7
SIL1-202ENST00000394817 MSS51Q4VC12 460 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 DARS2Q6PI48 645 aaKnown RBP19.4■□□□□ 0.7
SIL1-202ENST00000394817 SLC26A9Q7LBE3 791 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 ANKMY2Q8IV38 441 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 PLD5Q8N7P1 536 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 PYROXD1Q8WU10 500 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 CCT6BQ92526 530 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 FAF2Q96CS3 445 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 SGSM3Q96HU1 749 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 HHIPL1Q96JK4 782 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 WDR83Q9BRX9 315 aaKnown RBP19.4■□□□□ 0.7
SIL1-202ENST00000394817 ZNF670Q9BS34 389 aa19.4■□□□□ 0.7
SIL1-202ENST00000394817 C11orf84Q9BUA3 381 aaPredicted RBP19.4■□□□□ 0.7
SIL1-202ENST00000394817 FAM47DPA6NHR8 397 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 PRPF4O43172 522 aaKnown RBP eCLIP19.39■□□□□ 0.7
SIL1-202ENST00000394817 OAS1P00973 400 aaKnown RBP19.39■□□□□ 0.7
SIL1-202ENST00000394817 FGFR1P11362 822 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 TSHRP16473 764 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 HDAC4P56524 1084 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 BASP1P80723 227 aaKnown RBP19.39■□□□□ 0.7
SIL1-202ENST00000394817 CAP1Q01518 475 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 SLC20A2Q08357 652 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 TTC31Q49AM3 519 aaPredicted RBP19.39■□□□□ 0.7
SIL1-202ENST00000394817 LACTB2Q53H82 288 aaPredicted RBP19.39■□□□□ 0.7
SIL1-202ENST00000394817 ANKRD20A8PQ5CZ79 823 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 ZC3H12AQ5D1E8 599 aaKnown RBP19.39■□□□□ 0.7
SIL1-202ENST00000394817 SLC9A4Q6AI14 798 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 SCYL2Q6P3W7 929 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 CAPN12Q6ZSI9 719 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 ZC3H18Q86VM9 953 aaKnown RBP19.39■□□□□ 0.7
SIL1-202ENST00000394817 RTP4Q96DX8 246 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 ELAC2Q9BQ52 826 aaKnown RBP19.39■□□□□ 0.7
SIL1-202ENST00000394817 KATNAL1Q9BW62 490 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 B3GNT5Q9BYG0 378 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 GPATCH2LQ9NWQ4 482 aa19.39■□□□□ 0.7
SIL1-202ENST00000394817 PSMC3IPQ9P2W1 217 aaPredicted RBP19.39■□□□□ 0.7
SIL1-202ENST00000394817 XPO7Q9UIA9 1087 aaKnown RBP19.39■□□□□ 0.7
SIL1-202ENST00000394817 TCP11X1B4DZS4 312 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 APOL1O14791 398 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 SPTLC1O15269 473 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 HCRTO43612 131 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 SNX3O60493 162 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 CAPN15O75808 1086 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 CCDC130P13994 396 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 HOXC8P31273 242 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 TAF6P49848 677 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 CRYBB1P53674 252 aaPredicted RBP19.39■□□□□ 0.69
SIL1-202ENST00000394817 SLC18A1P54219 525 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 RNASELQ05823 741 aaKnown RBP19.39■□□□□ 0.69
SIL1-202ENST00000394817 TAX1BP1Q86VP1 789 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 PDIK1LQ8N165 341 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 PQLC3Q8N755 202 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 MAGEB18Q96M61 343 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 LPIN3Q9BQK8 851 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 AP5M1Q9H0R1 490 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 KDM4CQ9H3R0 1056 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 MLXIPLQ9NP71 852 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 RNF19AQ9NV58 838 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 KLK14Q9P0G3 267 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 RABGEF1Q9UJ41 708 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 Q9Y3F1 56 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 CAPN7Q9Y6W3 813 aa19.39■□□□□ 0.69
SIL1-202ENST00000394817 CFAP69A5D8W1 941 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 MYADML2A6NDP7 307 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 GHRP10912 638 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 STX2P32856 288 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 GNL1P36915 607 aaPredicted RBP19.38■□□□□ 0.69
SIL1-202ENST00000394817 FCGRTP55899 365 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 GEMIN4P57678 1058 aaKnown RBP19.38■□□□□ 0.69
SIL1-202ENST00000394817 ZNF200P98182 395 aaPredicted RBP19.38■□□□□ 0.69
SIL1-202ENST00000394817 KCNJ11Q14654 390 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 SV2CQ496J9 727 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 C7orf31Q8N865 590 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 PCDH19Q8TAB3 1148 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 GDAP1Q8TB36 358 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 TRIB2Q92519 343 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 CENPIQ92674 756 aaPredicted RBP19.38■□□□□ 0.69
SIL1-202ENST00000394817 DNAI2Q9GZS0 605 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 RNF39Q9H2S5 420 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 ACSS3Q9H6R3 686 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 USP29Q9HBJ7 922 aa19.38■□□□□ 0.69
SIL1-202ENST00000394817 H7C0C1 242 aa19.37■□□□□ 0.69
SIL1-202ENST00000394817 LMO2P25791 158 aa19.37■□□□□ 0.69
SIL1-202ENST00000394817 ADORA2BP29275 332 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms