RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CIB2O75838 187 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 KRT38O76015 456 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 SNRPAP09012 282 aaKnown RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 FGFR1P11362 822 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 HEATR6Q6AI08 1181 aaKnown RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 DENND5BQ6ZUT9 1274 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 CATSPER4Q7RTX7 472 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 ALYREFQ86V81 257 aaKnown RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 CRLF3Q8IUI8 442 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 ARFGAP1Q8N6T3 406 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 CCDC124Q96CT7 223 aaKnown RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 NSL1Q96IY1 281 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 THTPAQ9BU02 230 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 VPS11Q9H270 941 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 CYP4F11Q9HBI6 524 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 IL1RAPL1Q9NZN1 696 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 PAK5Q9P286 719 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 COL11A2P13942 1736 aaPredicted RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 ATAD5Q96QE3 1844 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 ENO4A6NNW6 628 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 NCF2P19878 526 aaPredicted RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 PTPN4P29074 926 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 EPHB1P54762 984 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 RBP5P82980 135 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 SLC25A11Q02978 314 aaKnown RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 NME3Q13232 169 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 RIPK1Q13546 671 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 TTLL4Q14679 1199 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 CFAP157Q5JU67 520 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 CAPRIN2Q6IMN6 1127 aaKnown RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 RFWD3Q6PCD5 774 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 FAM131BQ86XD5 332 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 SLC25A41Q8N5S1 370 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 NAT8LQ8N9F0 302 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 TMEM174Q8WUU8 243 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 ALKBH8Q96BT7 664 aaKnown RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 MIEF2Q96C03 454 aa10.96□□□□□ -0.66
ACTN1-203ENST00000394419 NAF1Q96HR8 494 aaKnown RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 DENND2DQ9H6A0 471 aaPredicted RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 MRPL42Q9Y6G3 142 aaKnown RBP10.96□□□□□ -0.66
ACTN1-203ENST00000394419 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-203ENST00000394419 LRRC37AA6NMS7 1700 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 CAPN9O14815 690 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 HBP1O60381 514 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 TOP3BO95985 862 aaKnown RBP10.95□□□□□ -0.66
ACTN1-203ENST00000394419 THOC5Q13769 683 aaKnown RBP10.95□□□□□ -0.66
ACTN1-203ENST00000394419 KPNB1Q14974 876 aaKnown RBP10.95□□□□□ -0.66
ACTN1-203ENST00000394419 POLNQ7Z5Q5 900 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 SLC26A11Q86WA9 606 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 E2F7Q96AV8 911 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 PRR11Q96HE9 360 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-203ENST00000394419 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-203ENST00000394419 GPR20Q99678 358 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 MAGEB5Q9BZ81 275 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 XYLT2Q9H1B5 865 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 RNPEPL1Q9HAU8 725 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 PRMT7Q9NVM4 692 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-203ENST00000394419 ADGRA2Q96PE1 1338 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 FCHO1O14526 889 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 PIGRP01833 764 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 VDRP11473 427 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 CALB2P22676 271 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 ZNF132P52740 706 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 AQP5P55064 265 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 ZNF280AP59817 542 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-203ENST00000394419 RASA2Q15283 850 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 PLEKHG4Q58EX7 1191 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 MAP1SQ66K74 1059 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-203ENST00000394419 LBX2Q6XYB7 198 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 RSPH3Q86UC2 560 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 DNAAF3Q8N9W5 541 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 DENND1AQ8TEH3 1009 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 FBXO41Q8TF61 875 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 C10orf82Q8WW14 230 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 CAMKK2Q96RR4 588 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 PEBP4Q96S96 227 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 ERAP1Q9NZ08 941 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 SIX4Q9UIU6 781 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 NRXN2Q9P2S2 1712 aa10.95□□□□□ -0.66
ACTN1-203ENST00000394419 LOC100653049A0A140TA62 436 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 TYROBPO43914 113 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 KRT34O76011 436 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 DDNO94850 711 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 IL18RAPO95256 599 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 ARL4AP40617 200 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 GHRHRQ02643 423 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 CA9Q16790 459 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 TTC39BQ5VTQ0 682 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 DRICH1Q6PGQ1 229 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 ADGRD1Q6QNK2 874 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 BZW1Q7L1Q6 419 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 AFG1LQ8WV93 481 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 NDRG1Q92597 394 aaKnown RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 FERMT1Q9BQL6 677 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 CXorf49A8MYA2 514 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 TM9SF1O15321 606 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 KRT36O76013 467 aa10.94□□□□□ -0.66
ACTN1-203ENST00000394419 F7P08709 466 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-203ENST00000394419 TGFB3P10600 412 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms