RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 HECTD3Q5T447 861 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 CDKAL1Q5VV42 579 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 CC2D1AQ6P1N0 951 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 DENND1BQ6P3S1 775 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZNF852Q6ZMS4 543 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZNF687Q8N1G0 1237 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 AOPEPQ8N6M6 819 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 DTWD2Q8NBA8 298 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 PDZD8Q8NEN9 1154 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 CLEC4CQ8WTT0 213 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 OSCP1Q8WVF1 389 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 OVCA2Q8WZ82 227 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 FAM3CQ92520 227 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 SECISBP2LQ93073 1101 aaKnown RBP8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 SHDQ96IW2 340 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 PHOX2BQ99453 314 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 LSM14BQ9BX40 385 aaKnown RBP8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 ULBP1Q9BZM6 244 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 DNAI2Q9GZS0 605 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 NACA2Q9H009 215 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 VPS16Q9H269 839 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 FBXO44Q9H4M3 255 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 TRPV5Q9NQA5 729 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 TLR8Q9NR97 1041 aaKnown RBP8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 ANO10Q9NW15 660 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 THG1LQ9NWX6 298 aaKnown RBP8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 DUS2Q9NX74 493 aaKnown RBP8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 DLGAP2Q9P1A6 1054 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZMYM5Q9UJ78 669 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 NAGPAQ9UK23 515 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 SCML2Q9UQR0 700 aa8.08□□□□□ -1.12
HMGB3P1-201ENST00000393368 SYCE3A1L190 88 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 ANTXRLA6NF34 631 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 SOBPA7XYQ1 873 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 XPO1O14980 1071 aaKnown RBP8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 THAP12O43422 761 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 LETM1O95202 739 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 HMBSP08397 361 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 PAEPP09466 180 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 ATP1A3P13637 1013 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 EEF1GP26641 437 aaKnown RBP8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 HOXC13P31276 330 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 PPP3CCP48454 512 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 PDE6CP51160 858 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 MFAP3P55082 362 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 PLCB2Q00722 1185 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 MYL5Q02045 173 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 BST2Q10589 180 aaKnown RBP8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 FZD5Q13467 585 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 NCAPHQ15003 741 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 EML3Q32P44 896 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 ITPRIPL2Q3MIP1 535 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 PKDCCQ504Y2 493 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 RAB41Q5JT25 222 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 C10orf120Q5SQS8 335 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 SNX30Q5VWJ9 437 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 DPY19L2P1Q6NXN4 242 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 PMF1Q6P1K2 205 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 LCLAT1Q6UWP7 414 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 Q6ZS52 159 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 BHLHA9Q7RTU4 235 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 MIB1Q86YT6 1006 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 PASD1Q8IV76 773 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 HSD3B7Q9H2F3 369 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 FAM124BQ9H5Z6 455 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 ECT2Q9H8V3 914 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 FBRSL1Q9HCM7 1045 aaKnown RBP8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 PNPLA8Q9NP80 782 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 COMMD8Q9NX08 183 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 HESX1Q9UBX0 185 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 RASAL2Q9UJF2 1139 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 DNAJC12Q9UKB3 198 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 FHOD1Q9Y613 1164 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 USP3Q9Y6I4 520 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 PATJQ8NI35 1801 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 GREB1Q4ZG55 1949 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 USP34Q70CQ2 3546 aa8.07□□□□□ -1.12
HMGB3P1-201ENST00000393368 GTPBP10A4D1E9 387 aaKnown RBP8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 YJEFN3A6XGL0 299 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 E7ENQ6 273 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 MAN2B1O00754 1011 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 ZBED1O96006 694 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 CYP17A1P05093 508 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 SETSIPP0DME0 302 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 CHRNB1P11230 501 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 GNA15P30679 374 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 GJA4P35212 333 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 PLA2G4AP47712 749 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 TUBP50607 506 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 COPB1P53618 953 aaKnown RBP8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 SLC8A3P57103 927 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 YWHAGP61981 247 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 EFEMP1Q12805 493 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 RAPGEF1Q13905 1077 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 GAS6Q14393 721 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 PDGFRLQ15198 375 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 ANGPT1Q15389 498 aa8.06□□□□□ -1.12
HMGB3P1-201ENST00000393368 GAB4Q2WGN9 574 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms