RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 SNRNP25Q9BV90 132 aaKnown RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 ULBP1Q9BZM6 244 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 RAB17Q9H0T7 212 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.64■□□□□ 0.09
MKS1-202ENST00000393119 NEU2Q9Y3R4 380 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 MRPL42Q9Y6G3 142 aaKnown RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 SHOX2O60902 331 aaPredicted RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 FYNP06241 537 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 SETSIPP0DME0 302 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 LHX1P48742 406 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 RPL34P49207 117 aaKnown RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 FAM189BP81408 668 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 OTUD4Q01804 1114 aaKnown RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 MTM1Q13496 603 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 OTUD1Q5VV17 481 aaPredicted RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 TMEM173Q86WV6 379 aaPredicted RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 SCAMP5Q8TAC9 235 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 MYCBPAPQ8TBZ2 947 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 ACTL9Q8TC94 416 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 STK32AQ8WU08 396 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 ZNF148Q9UQR1 794 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 NR2E3Q9Y5X4 410 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 PRPSAP2O60256 369 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 UPP2O95045 317 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 RPLP2P05387 115 aaKnown RBP15.63■□□□□ 0.09
MKS1-202ENST00000393119 KRT7P08729 469 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 FAM200BP0CF97 657 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 DPYSL3Q14195 570 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 CCNG2Q16589 344 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 SKIDA1Q1XH10 827 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 TRIM60Q495X7 471 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 SYCP2LQ5T4T6 812 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 SWT1Q5T5J6 900 aaKnown RBP15.63■□□□□ 0.09
MKS1-202ENST00000393119 KCTD16Q68DU8 428 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 OVOS1Q6IE37 1185 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 C1orf228Q6PIY5 440 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 GSTA5Q7RTV2 222 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 TMC3Q7Z5M5 1100 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 POLNQ7Z5Q5 900 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 CCDC25Q86WR0 208 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 CEP57Q86XR8 500 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 COLGALT2Q8IYK4 626 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 IQCKQ8N0W5 287 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 UBLCP1Q8WVY7 318 aaPredicted RBP15.63■□□□□ 0.09
MKS1-202ENST00000393119 EDEM1Q92611 657 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 FMO2Q99518 471 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 BEGAINQ9BUH8 593 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 FAM204AQ9H8W3 233 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 ANLNQ9NQW6 1124 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 FAM114A2Q9NRY5 505 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 DDX56Q9NY93 547 aaKnown RBP15.63■□□□□ 0.09
MKS1-202ENST00000393119 FRMPD3Q5JV73 1810 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.63■□□□□ 0.09
MKS1-202ENST00000393119 HHLA1C9JL84 531 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 TJP3O95049 919 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 ODC1P11926 461 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 MRPS5P82675 430 aaKnown RBP15.63■□□□□ 0.09
MKS1-202ENST00000393119 FAAP100Q0VG06 881 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 BYSLQ13895 437 aaKnown RBP15.63■□□□□ 0.09
MKS1-202ENST00000393119 PLEKHG4Q58EX7 1191 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 SLC26A9Q7LBE3 791 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 ATL2Q8NHH9 583 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 PGLYRP2Q96PD5 576 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 C11orf84Q9BUA3 381 aaPredicted RBP15.63■□□□□ 0.09
MKS1-202ENST00000393119 LRRC4Q9HBW1 653 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 PLAAQ9Y263 795 aa15.63■□□□□ 0.09
MKS1-202ENST00000393119 IFNB1P01574 187 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 CYP2F1P24903 491 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 HSPA9P38646 679 aaKnown RBP15.62■□□□□ 0.09
MKS1-202ENST00000393119 ADCY8P40145 1251 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 GPR15P49685 360 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 ARSEP51690 589 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 TLE2Q04725 743 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 NME3Q13232 169 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 ARHGEF6Q15052 776 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 CLUL1Q15846 466 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.62■□□□□ 0.09
MKS1-202ENST00000393119 ZC3H18Q86VM9 953 aaKnown RBP15.62■□□□□ 0.09
MKS1-202ENST00000393119 TMEM86AQ8N2M4 240 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 SH2D3CQ8N5H7 860 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 NCAPGQ9BPX3 1015 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 EPB41L4BQ9H329 900 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 SEMA4AQ9H3S1 761 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 RASAL2Q9UJF2 1139 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 OGDHLQ9ULD0 1010 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 SQORQ9Y6N5 450 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 M0QZQ0 153 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 RNF40O75150 1001 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 SHBGP04278 402 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 CHRM1P11229 460 aaPredicted RBP15.62■□□□□ 0.09
MKS1-202ENST00000393119 PCK1P35558 622 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 ITGA8P53708 1063 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 PRMT2P55345 433 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 GAD2Q05329 585 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 DSC1Q08554 894 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 INTS6LQ5JSJ4 861 aaKnown RBP15.62■□□□□ 0.09
MKS1-202ENST00000393119 HP1BP3Q5SSJ5 553 aaPredicted RBP15.62■□□□□ 0.09
MKS1-202ENST00000393119 DCLRE1AQ6PJP8 1040 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 GPR152Q8TDT2 470 aa15.62■□□□□ 0.09
MKS1-202ENST00000393119 HSFY1Q96LI6 401 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms