RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 KDM4CQ9H3R0 1056 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 STOML1Q9UBI4 398 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 CXCL11O14625 94 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 CYP2B6P20813 491 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 STIP1P31948 543 aaKnown RBP10.95□□□□□ -0.66
CALD1-203ENST00000393118 CYP1B1Q16678 543 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 UNC45BQ8IWX7 931 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 TRIM42Q8IWZ5 723 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 CYP4X1Q8N118 509 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 TEX9Q8N6V9 391 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 GSDMBQ8TAX9 411 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 HERPUD2Q9BSE4 406 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 SIK2Q9H0K1 926 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 CORO1CQ9ULV4 474 aaPredicted RBP10.95□□□□□ -0.66
CALD1-203ENST00000393118 KBTBD13C9JR72 458 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 MSCO60682 206 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 ARF4P18085 180 aaPredicted RBP10.95□□□□□ -0.66
CALD1-203ENST00000393118 ADRA1DP25100 572 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 ITKQ08881 620 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 DGKDQ16760 1214 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 WLSQ5T9L3 541 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 ARHGAP24Q8N264 748 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 TTC39CQ8N584 583 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 C1orf127Q8N9H9 656 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 AGR3Q8TD06 166 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 CENPTQ96BT3 561 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 PGBD4Q96DM1 585 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 C12orf42Q96LP6 360 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 CENPKQ9BS16 269 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 SPON1Q9HCB6 807 aa10.95□□□□□ -0.66
CALD1-203ENST00000393118 A0A1W2PPM1 405 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 LRCH4O75427 683 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 ACO1P21399 889 aaKnown RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 ZNF268Q14587 947 aaPredicted RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 EFTUD2Q15029 972 aaKnown RBP eCLIP10.94□□□□□ -0.66
CALD1-203ENST00000393118 GRIK4Q16099 956 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 MAP1SQ66K74 1059 aaPredicted RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 CCDC125Q86Z20 511 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 TMEM130Q8N3G9 435 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 SPOCK2Q92563 424 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 CPSF3Q9UKF6 684 aaKnown RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 ATP9BO43861 1147 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 HMGCRP04035 888 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 ERBB2P04626 1255 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 MCF2P10911 925 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 ICAM3P32942 547 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 CCDC92Q53HC0 331 aaPredicted RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 LRRC6Q86X45 466 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 CRLF3Q8IUI8 442 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 TCP10LQ8TDR4 215 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 CKAP2Q8WWK9 683 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 C12orf65Q9H3J6 166 aaKnown RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 MINDY3Q9H8M7 445 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 TNFSF13BQ9Y275 285 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 AVILO75366 819 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 PYGBP11216 843 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 ACAT1P24752 427 aaKnown RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 RBL1P28749 1068 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 EPHX2P34913 555 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 ARL1P40616 181 aaPredicted RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 CPA2P48052 419 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 RAB27AP51159 221 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 ZC3H12AQ5D1E8 599 aaKnown RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 CWF19L1Q69YN2 538 aaKnown RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 NXNQ6DKJ4 435 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 NOTUMQ6P988 496 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 NDUFAF2Q8N183 169 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 C12orf50Q8NA57 414 aaPredicted RBP10.94□□□□□ -0.66
CALD1-203ENST00000393118 SMC1BQ8NDV3 1235 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 TMEM237Q96Q45 408 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 HAPLN2Q9GZV7 340 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 MANSC1Q9H8J5 431 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 SPC25Q9HBM1 224 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 HMGXB4Q9UGU5 601 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 STAP1Q9ULZ2 295 aa10.94□□□□□ -0.66
CALD1-203ENST00000393118 DLEC1Q9Y238 1755 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 NVLO15381 856 aaKnown RBP10.93□□□□□ -0.66
CALD1-203ENST00000393118 STILQ15468 1287 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 KYAT1Q16773 422 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 DENND5BQ6ZUT9 1274 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 TNIP3Q96KP6 325 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 ZNF560Q96MR9 790 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 GORASP1Q9BQQ3 440 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 ASB7Q9H672 318 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 CYP3A43Q9HB55 503 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 NENFQ9UMX5 172 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 COMMD10Q9Y6G5 202 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 C10orf71Q711Q0 1435 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 COL24A1Q17RW2 1714 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 PDHXO00330 501 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 PAEPP09466 180 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 NCF2P19878 526 aaPredicted RBP10.93□□□□□ -0.66
CALD1-203ENST00000393118 SERPINB3P29508 390 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 OGDHQ02218 1023 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 EFHC2Q5JST6 749 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 ATG16L1Q676U5 607 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 FAM183BPQ6ZVS7 135 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 KDELC2Q7Z4H8 507 aa10.93□□□□□ -0.66
CALD1-203ENST00000393118 B3GNT5Q9BYG0 378 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms