RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PPP4R4Q6NUP7 873 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 PACS2Q86VP3 889 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 TXNRD3Q86VQ6 643 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 WDR49Q8IV35 697 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 EIF1ADQ8N9N8 165 aaKnown RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.54□□□□□ -0.24
LCA5-202ENST00000392959 STKLD1Q8NE28 680 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 ZNF606Q8WXB4 792 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 RPRD1AQ96P16 312 aaPredicted RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 NINJ2Q9NZG7 142 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 H2AFY2Q9P0M6 372 aaPredicted RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 ERCC6L2Q5T890 1561 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 NRXN1Q9ULB1 1477 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 JCHAINP01591 159 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 RBP1P09455 135 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 HARS2P49590 506 aaKnown RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 ST8SIA6P61647 398 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 TBL3Q12788 808 aaKnown RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 DGKDQ16760 1214 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 UGT3A1Q6NUS8 523 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 SH3RF1Q7Z6J0 888 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 BBS2Q9BXC9 721 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 EHD4Q9H223 541 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 CYP3A43Q9HB55 503 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 GEMIN8Q9NWZ8 242 aaKnown RBP13.54□□□□□ -0.24
LCA5-202ENST00000392959 KLK14Q9P0G3 267 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 PCDHGC5Q9Y5F6 944 aa13.54□□□□□ -0.24
LCA5-202ENST00000392959 HOXD10P28358 340 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 SSTR1P30872 391 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 SLC34A1Q06495 639 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 FUKQ8N0W3 1084 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
LCA5-202ENST00000392959 MYOZ2Q9NPC6 264 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 TCF7L2Q9NQB0 619 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 BLOC1S4Q9NUP1 217 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 ZNF446Q9NWS9 450 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 RNF112Q9ULX5 631 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 C15orf41Q9Y2V0 281 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 ADGRA3Q8IWK6 1321 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 ARIH2O95376 493 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 FBXW4P57775 412 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 CACHD1Q5VU97 1274 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 PLEKHM3Q6ZWE6 761 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 SAMD3Q8N6K7 520 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 KYQ8NBH2 561 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 DIS3LQ8TF46 1054 aaKnown RBP13.53□□□□□ -0.24
LCA5-202ENST00000392959 VCPIP1Q96JH7 1222 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 PRMT6Q96LA8 375 aaPredicted RBP13.53□□□□□ -0.24
LCA5-202ENST00000392959 ZDHHC15Q96MV8 337 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 BTBD10Q9BSF8 475 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 SPASTQ9UBP0 616 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 VPS26AO75436 327 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 KRT75O95678 551 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 RARRES1P49788 294 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 GCNT1Q02742 428 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 NFYCQ13952 458 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 ATP6V0D2Q8N8Y2 350 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 USP6NLQ92738 828 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 TMEM176AQ96HP8 235 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 ZFYVE19Q96K21 471 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 NUDT12Q9BQG2 462 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 PRDM5Q9NQX1 630 aaPredicted RBP13.53□□□□□ -0.24
LCA5-202ENST00000392959 TMX2Q9Y320 296 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 SPATA31A1Q5TZJ5 1347 aa13.53□□□□□ -0.24
LCA5-202ENST00000392959 C2orf81A6NN90 581 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 FSBPO95073 299 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 MAPTP10636 758 aaKnown RBP13.52□□□□□ -0.24
LCA5-202ENST00000392959 OR1G1P47890 313 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 ITGA9Q13797 1035 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 TAF1CQ15572 869 aaPredicted RBP13.52□□□□□ -0.24
LCA5-202ENST00000392959 TMEM119Q4V9L6 283 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.24
LCA5-202ENST00000392959 PPP2R3CQ969Q6 453 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 AGKQ53H12 422 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 TTC30AQ86WT1 665 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 TDRD5Q8NAT2 981 aaKnown RBP13.52□□□□□ -0.24
LCA5-202ENST00000392959 ABHD8Q96I13 439 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 PDCD2LQ9BRP1 358 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 CINPQ9BW66 212 aaPredicted RBP13.52□□□□□ -0.24
LCA5-202ENST00000392959 IL17RBQ9NRM6 502 aa13.52□□□□□ -0.24
LCA5-202ENST00000392959 DRG1Q9Y295 367 aaKnown RBP13.52□□□□□ -0.24
LCA5-202ENST00000392959 GOLGA8TH3BQL2 631 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 PDE2AO00408 941 aaPredicted RBP13.52□□□□□ -0.25
LCA5-202ENST00000392959 B3GAT3O94766 335 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 SERPINE1P05121 402 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 STAG3L1P0CL83 205 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 NME5P56597 212 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 PKN2Q16513 984 aaKnown RBP13.52□□□□□ -0.25
LCA5-202ENST00000392959 NFIL3Q16649 462 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 INTS5Q6P9B9 1019 aaKnown RBP13.52□□□□□ -0.25
LCA5-202ENST00000392959 TMEM237Q96Q45 408 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 GPAMQ9HCL2 828 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.25
LCA5-202ENST00000392959 MPP6Q9NZW5 540 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 SATB2Q9UPW6 733 aa13.52□□□□□ -0.25
LCA5-202ENST00000392959 N4BP2L1Q5TBK1 243 aaPredicted RBP13.52□□□□□ -0.25
LCA5-202ENST00000392959 MFSD7Q6UXD7 560 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms