RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PLTPP55058 493 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 CDH6P55285 790 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 YWHAZP63104 245 aaKnown RBP11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 TSPY1Q01534 308 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 YWHAHQ04917 246 aaPredicted RBP11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 DPYSL3Q14195 570 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 OASLQ15646 514 aaKnown RBP11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 SLC25A52Q3SY17 297 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 TMC3Q7Z5M5 1100 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 CRIPAKQ8N1N5 446 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 SLC35B2Q8TB61 432 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 FAM71BQ8TC56 605 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 FBXO25Q8TCJ0 367 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 ART4Q93070 314 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 NT5C3BQ969T7 300 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 SLC2A13Q96QE2 648 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 KCNK16Q96T55 309 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 FAM118BQ9BPY3 351 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 HIPK3Q9H422 1215 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 TMEM30AQ9NV96 361 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 DNPEPQ9ULA0 475 aa11.96□□□□□ -0.5
SMARCAL1-203ENST00000392128 MICAL3Q7RTP6 2002 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 DCDC2CA8MYV0 355 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 AGPSO00116 658 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 HOXA2O43364 376 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 TRAPPC3O43617 180 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 ITGAVP06756 1048 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 TFE3P19532 575 aaPredicted RBP11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 NOS2P35228 1153 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 OR1G1P47890 313 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 NDUFV1P49821 464 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 ATN1P54259 1190 aaPredicted RBP11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 VCPP55072 806 aaKnown RBP11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 DAOAP59103 153 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 FAAP100Q0VG06 881 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 TCTN1Q2MV58 587 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 HSP90B2PQ58FF3 399 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 SPDYCQ5MJ68 293 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 SCYL2Q6P3W7 929 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 BNIPLQ7Z465 357 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 IQCKQ8N0W5 287 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 DEFB106AQ8N104 65 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 CCDC89Q8N998 374 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 CCHCR1Q8TD31 782 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 FAM149B1Q96BN6 582 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 SNF8Q96H20 258 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 CASD1Q96PB1 797 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 SNRNP25Q9BV90 132 aaKnown RBP11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 CALN1Q9BXU9 219 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 ADAM33Q9BZ11 813 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 TXLNGYQ9BZA5 131 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 PNPLA8Q9NP80 782 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 DNAJB4Q9UDY4 337 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 MTRF1LQ9UGC7 380 aaKnown RBP11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 ASIC3Q9UHC3 531 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 COL4A4P53420 1690 aaPredicted RBP11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 VWA8A3KMH1 1905 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 APOC4-APOC2K7ER74 178 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 PPFIA2O75334 1257 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 OAZ2O95190 189 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 APOC2P02655 101 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 ITIH2P19823 946 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 IVDP26440 423 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 KLRC2P26717 231 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 GGCXP38435 758 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 CALCOCO2Q13137 446 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 MTMR3Q13615 1198 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 KRT81Q14533 505 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 ERMARDQ5T6L9 678 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 GPRIN1Q7Z2K8 1008 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 LRRTM3Q86VH5 581 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 RFX6Q8HWS3 928 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 SCML4Q8N228 414 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 ALLCQ8N6M5 410 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 NDRG1Q92597 394 aaKnown RBP11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 ULBP1Q9BZM6 244 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 POPDC2Q9HBU9 364 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 DMAP1Q9NPF5 467 aaPredicted RBP11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 TMLHEQ9NVH6 421 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 LRFN2Q9ULH4 789 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 STAP1Q9ULZ2 295 aa11.95□□□□□ -0.5
SMARCAL1-203ENST00000392128 SYN3O14994 580 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 SYF2O95926 243 aaKnown RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 DYNLT1P63172 113 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 OTUD4Q01804 1114 aaKnown RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 TFDP2Q14188 446 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 DPYSL2Q16555 572 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 CFAP58Q5T655 872 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 NPAS4Q8IUM7 802 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 ACTL9Q8TC94 416 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 PIK3R5Q8WYR1 880 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 SCLYQ96I15 445 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZNF333Q96JL9 665 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 TMEM209Q96SK2 561 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 NPY6RQ99463 290 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 ZNF670Q9BS34 389 aa11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 MAK16Q9BXY0 300 aaKnown RBP11.94□□□□□ -0.5
SMARCAL1-203ENST00000392128 NRDE2Q9H7Z3 1164 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms