RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 LCLAT1Q6UWP7 414 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 RRAGAQ7L523 313 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 TTC30AQ86WT1 665 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 ARHGEF19Q8IW93 802 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 ZNF687Q8N1G0 1237 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 SYNPOQ8N3V7 929 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 OTUB2Q96DC9 234 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 CHRDQ9H2X0 955 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 EBF3Q9H4W6 596 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 ECT2Q9H8V3 914 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 LRRC4Q9HBW1 653 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 APEX2Q9UBZ4 518 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 CNTN6Q9UQ52 1028 aa13.35□□□□□ -0.27
GGPS1-203ENST00000391855 COL4A3Q01955 1670 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 CYP26A1O43174 497 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 RALAP11233 206 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 ATP5C1P36542 298 aaKnown RBP13.34□□□□□ -0.27
GGPS1-203ENST00000391855 PLA2G4AP47712 749 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 PDE4CQ08493 712 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 CNGA2Q16280 664 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 VWA3BQ502W6 1294 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 RAB41Q5JT25 222 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 TRIM68Q6AZZ1 485 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 C1orf210Q8IVY1 113 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 ATOH1Q92858 354 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-203ENST00000391855 KAT5Q92993 513 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 KREMEN1Q96MU8 473 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 TUBGCP2Q9BSJ2 902 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 NDST4Q9H3R1 872 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 CCSER2Q9H7U1 834 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 SMPD4Q9NXE4 827 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 FBXO4Q9UKT5 387 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.34□□□□□ -0.27
GGPS1-203ENST00000391855 SH3BP1Q9Y3L3 701 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 MTF2Q9Y483 593 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-203ENST00000391855 NFE2L3Q9Y4A8 694 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 WNT6Q9Y6F9 365 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 MUC6Q6W4X9 2439 aa13.34□□□□□ -0.27
GGPS1-203ENST00000391855 KCNJ18B7U540 433 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 H0Y858 1186 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 TRDMT1O14717 391 aaKnown RBP13.33□□□□□ -0.28
GGPS1-203ENST00000391855 LAMTOR5O43504 91 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 CHRNB1P11230 501 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 KRT5P13647 590 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 ARSAP15289 507 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 SOX9P48436 509 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 KCNJ12Q14500 433 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 PPP2R5DQ14738 602 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 SCML4Q8N228 414 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 TTC16Q8NEE8 873 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 KCTD13Q8WZ19 329 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 LMAN1LQ9HAT1 526 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 UBE2TQ9NPD8 197 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-203ENST00000391855 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
GGPS1-203ENST00000391855 SPATA6Q9NWH7 488 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-203ENST00000391855 CFAP97Q9P2B7 532 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 NAGPAQ9UK23 515 aa13.33□□□□□ -0.28
GGPS1-203ENST00000391855 LSM7Q9UK45 103 aaKnown RBP13.33□□□□□ -0.28
GGPS1-203ENST00000391855 A0A1W2PQH9 124 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 M0QYV0 167 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 MED7O43513 233 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 ZBED1O96006 694 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 TPM2P07951 284 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 RARGP13631 454 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 DRD1P21728 446 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 PON1P27169 355 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 GJA4P35212 333 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 TKTL1P51854 596 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 ZXDBP98169 803 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
GGPS1-203ENST00000391855 FZD5Q13467 585 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 ZNF528Q3MIS6 628 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 FBXO43Q4G163 708 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 PKDCCQ504Y2 493 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 PM20D1Q6GTS8 502 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 TXNDC11Q6PKC3 985 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 SIX6OS1Q8N1H7 587 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 ANKRD20A12PQ8NF67 263 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 CCDC26Q8TAB7 109 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 TTC8Q8TAM2 541 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 ZFRQ96KR1 1074 aaKnown RBP13.32□□□□□ -0.28
GGPS1-203ENST00000391855 HSFY1Q96LI6 401 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 CRACR2AQ9BSW2 395 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 NMUR1Q9HB89 426 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 CNGB3Q9NQW8 809 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 DNMT3LQ9UJW3 386 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 F5P12259 2224 aa13.32□□□□□ -0.28
GGPS1-203ENST00000391855 RNF225M0QZC1 329 aaPredicted RBP13.31□□□□□ -0.28
GGPS1-203ENST00000391855 ADH1CP00326 375 aa13.31□□□□□ -0.28
GGPS1-203ENST00000391855 SLC9A1P19634 815 aa13.31□□□□□ -0.28
GGPS1-203ENST00000391855 PTMSP20962 102 aa13.31□□□□□ -0.28
GGPS1-203ENST00000391855 BRD2P25440 801 aaKnown RBP13.31□□□□□ -0.28
GGPS1-203ENST00000391855 NBL1P41271 181 aa13.31□□□□□ -0.28
GGPS1-203ENST00000391855 CCR3P51677 355 aa13.31□□□□□ -0.28
GGPS1-203ENST00000391855 CCINQ13939 588 aa13.31□□□□□ -0.28
GGPS1-203ENST00000391855 GSE1Q14687 1217 aa13.31□□□□□ -0.28
GGPS1-203ENST00000391855 PON2Q15165 354 aa13.31□□□□□ -0.28
GGPS1-203ENST00000391855 TCP11X2Q5H9J9 407 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms