RNA–Protein interactions for RNA: ENST00000391089.1

SNORA48.4-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 134 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.4-201ENST00000391089 DENND1AQ8TEH3 1009 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 PTCD2Q8WV60 388 aaKnown RBP5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 SCG3Q8WXD2 468 aaKnown RBP5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 CDKL2Q92772 493 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 KAT2BQ92831 832 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 INPP5DQ92835 1189 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 ATP2A3Q93084 1043 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 RAB3IPQ96QF0 476 aaPredicted RBP5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 APBA2Q99767 749 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 BEGAINQ9BUH8 593 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 TRPV6Q9H1D0 765 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 SNX25Q9H3E2 840 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 RXFP1Q9HBX9 757 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 LRRC4CQ9HCJ2 640 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 TRPC7Q9HCX4 862 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 PPANQ9NQ55 473 aaKnown RBP5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 TXLNGQ9NUQ3 528 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 COMMD8Q9NX08 183 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 BCCIPQ9P287 314 aaKnown RBP eCLIP5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 NXF1Q9UBU9 619 aaKnown RBP5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 MID2Q9UJV3 735 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 TSPAN16Q9UKR8 245 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 TRHDEQ9UKU6 1024 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 ZHX1Q9UKY1 873 aaPredicted RBP5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 SLC12A4Q9UP95 1085 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 NAALADL1Q9UQQ1 740 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 USH1CQ9Y6N9 552 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 PLXNA1Q9UIW2 1896 aa5.55□□□□□ -1.52
SNORA48.4-201ENST00000391089 CITO14578 2027 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 TCRBV7S2A1N4TA0A589 114 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 TLDC2A0PJX2 215 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 CCDC189A1A4V9 331 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 C17orf102A2RUQ5 167 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 TMEM88BA6NKF7 163 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 H3BRJ5 948 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 CHUKO15111 745 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 H2AFYO75367 372 aaKnown RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 ALDH1A2O94788 518 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 ASMTLO95671 621 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 CYP11A1P05108 521 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SMIM10L2AP0DMW4 78 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SMIM10L2BP0DMW5 78 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 TROVE2P10155 538 aaKnown RBP eCLIP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 ALADP13716 330 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 PECAM1P16284 738 aaPredicted RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SMPD1P17405 629 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 CD58P19256 250 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 TYMPP19971 482 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 KCNA4P22459 653 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 MARK3P27448 753 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 MSH2P43246 934 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 MAGEA3P43357 314 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 KCNJ1P48048 391 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 CDK7P50613 346 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 MNAT1P51948 309 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 CDH6P55285 790 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 WNT7BP56706 349 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 NAA20P61599 178 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 YWHAZP63104 245 aaKnown RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 IRX1P78414 480 aaPredicted RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 COG7P83436 770 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 ZNF200P98182 395 aaPredicted RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 OTUD4Q01804 1114 aaKnown RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 NRG1Q02297 640 aaPredicted RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SLC18A2Q05940 514 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SEMA5AQ13591 1074 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SNX1Q13596 522 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 LAMB3Q13751 1172 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 KRT81Q14533 505 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 KCNJ11Q14654 390 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 MFSD10Q14728 455 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SNX17Q15036 470 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SEPT7Q16181 437 aaKnown RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 KYNUQ16719 465 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 PARP6Q2NL67 630 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 ANKRD20A8PQ5CZ79 823 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 ZBTB41Q5SVQ8 909 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 TMCO4Q5TGY1 634 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 PRAMEF18Q5VWM3 479 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 EEF1DP3Q658K8 133 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 ATG16L1Q676U5 607 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 DENND1BQ6P3S1 775 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 KYAT3Q6YP21 454 aaKnown RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 C3orf62Q6ZUJ4 267 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SPATA21Q7Z572 469 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 MRPL10Q7Z7H8 261 aaKnown RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 CCDC13Q8IYE1 715 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SH2D3CQ8N5H7 860 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 PLD5Q8N7P1 536 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SLC44A1Q8WWI5 657 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 SREK1Q8WXA9 508 aaKnown RBP5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 RXFP2Q8WXD0 754 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 BRI3BPQ8WY22 251 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 CPT1BQ92523 772 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 PGBD4Q96DM1 585 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 CLMNQ96JQ2 1002 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 BTBD6Q96KE9 485 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 ACBD6Q9BR61 282 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 DUSP16Q9BY84 665 aa5.54□□□□□ -1.52
SNORA48.4-201ENST00000391089 PITPNM3Q9BZ71 974 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms