RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 USP4Q13107 963 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 PM20D1Q6GTS8 502 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 PMF1Q6P1K2 205 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 DENND1BQ6P3S1 775 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 CACNA2D4Q7Z3S7 1137 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 DDX42Q86XP3 938 aaKnown RBP eCLIP15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 SCML4Q8N228 414 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 STK32AQ8WU08 396 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 PDCL3Q9H2J4 239 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 CCSER2Q9H7U1 834 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 CYLDQ9NQC7 956 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 CLIC5Q9NZA1 410 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 NAGPAQ9UK23 515 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 CPQQ9Y646 472 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 CUL9Q8IWT3 2517 aa15.81■□□□□ 0.12
IGHV3-53-201ENST00000390627 TMEM221A6NGB7 291 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 M0R296 226 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 FBXO21O94952 628 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 TPM3P06753 285 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 RARGP13631 454 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 LCP1P13796 627 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 CYP11B1P15538 503 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 YWHAGP61981 247 aaKnown RBP eCLIP15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 MTF1Q14872 753 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 NR1I3Q14994 352 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 ZNF77Q15935 545 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 CC2D1AQ6P1N0 951 aaPredicted RBP15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 KLHDC10Q6PID8 442 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 FMNL3Q8IVF7 1028 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 SH3RF2Q8TEC5 729 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 ASIC4Q96FT7 647 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 NOX5Q96PH1 765 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 RNF38Q9H0F5 515 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 LHX5Q9H2C1 402 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 NMUR1Q9HB89 426 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 TRPV5Q9NQA5 729 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 ST7Q9NRC1 585 aa15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.8■□□□□ 0.12
IGHV3-53-201ENST00000390627 HELZP42694 1942 aaKnown RBP15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 SART1O43290 800 aaKnown RBP15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 GFPT2O94808 682 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 ATP5C1P36542 298 aaKnown RBP15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 RPL34P49207 117 aaKnown RBP15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 PGFP49763 221 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 DAOAP59103 153 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 PDCLQ13371 301 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 TMEM31Q5JXX7 168 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 SCD5Q86SK9 330 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 ZNF677Q86XU0 584 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 PASD1Q8IV76 773 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 ZNF276Q8N554 614 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 KIAA1958Q8N8K9 716 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 TTC16Q8NEE8 873 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 CSGALNACT1Q8TDX6 532 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 EPS8L1Q8TE68 723 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 IRGQQ8WZA9 623 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 GOLGA1Q92805 767 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 LRRC3BQ96PB8 259 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 SLC4A5Q9BY07 1137 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 ARHGEF3Q9NR81 526 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 OSER1Q9NX31 292 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 SMPD4Q9NXE4 827 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 CA14Q9ULX7 337 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 TECTAO75443 2155 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 BDP1A6H8Y1 2624 aa15.79■□□□□ 0.12
IGHV3-53-201ENST00000390627 LEFTY2O00292 366 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 GPR37L1O60883 481 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 CCDC172P0C7W6 258 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 SNX16P57768 344 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 GOLGA8FQ08AF8 430 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 GOLGA8DPQ0D2H9 430 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 PDGFRLQ15198 375 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 MLF2Q15773 248 aaPredicted RBP15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 C10orf120Q5SQS8 335 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 BTBD8Q5XKL5 378 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 RSRC2Q7L4I2 434 aaKnown RBP15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 BHLHA9Q7RTU4 235 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 BMP8AQ7Z5Y6 402 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 SIX5Q8N196 739 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 TMEM35BQ8NCS4 154 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 RNF214Q8ND24 703 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 RIN3Q8TB24 985 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 SHDQ96IW2 340 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 MFSD1Q9H3U5 465 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 OLA1Q9NTK5 396 aaKnown RBP15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 IFNKQ9P0W0 207 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 DNMT3LQ9UJW3 386 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 MYO6Q9UM54 1294 aa15.78■□□□□ 0.12
IGHV3-53-201ENST00000390627 FAM86C2PA6NEL3 165 aa15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 PRR33A8MZF0 331 aa15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 ARNTLO00327 626 aa15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 PIK3R2O00459 728 aa15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 CBFA2T2O43439 604 aa15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 LSM8O95777 96 aaKnown RBP15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 IFNAR2P48551 515 aa15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 PRKCQQ04759 706 aa15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 SLC44A4Q53GD3 710 aa15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 TAF3Q5VWG9 929 aa15.77■□□□□ 0.12
IGHV3-53-201ENST00000390627 TMEM110Q86TL2 294 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms