RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 KAT5Q92993 513 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 ATP2A3Q93084 1043 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 CNOT6LQ96LI5 555 aaKnown RBP12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 KREMEN1Q96MU8 473 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 ZSWIM1Q9BR11 485 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 CCSER2Q9H7U1 834 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 NMUR1Q9HB89 426 aa12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 FBRSL1Q9HCM7 1045 aaKnown RBP12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 PRMT8Q9NR22 394 aaPredicted RBP12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 TLR8Q9NR97 1041 aaKnown RBP12.02□□□□□ -0.49
IGHV4-28-201ENST00000390612 E2F8A0AVK6 867 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 O00370 1275 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 CYP26A1O43174 497 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 GREM1O60565 184 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 TLR5O60602 858 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 MBL2P11226 248 aaPredicted RBP12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 VDRP11473 427 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 IFNAR2P48551 515 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 CETN1Q12798 172 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 PON2Q15165 354 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 PM20D1Q6GTS8 502 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 FSTL4Q6MZW2 842 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 ALYREFQ86V81 257 aaKnown RBP12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 PIGZQ86VD9 579 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 DDX42Q86XP3 938 aaKnown RBP eCLIP12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 SYNPOQ8N3V7 929 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 TFAP2BQ92481 460 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 JAKMIP2Q96AA8 810 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 GBP4Q96PP9 640 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 KLF16Q9BXK1 252 aaPredicted RBP12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 INTS2Q9H0H0 1204 aaKnown RBP12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 THAP9Q9H5L6 903 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 SPATA6Q9NWH7 488 aaPredicted RBP12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 SMPD4Q9NXE4 827 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 CLIC5Q9NZA1 410 aa12.01□□□□□ -0.49
IGHV4-28-201ENST00000390612 CEP250Q9BV73 2442 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 RALGAPA1Q6GYQ0 2036 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 GTPBP10A4D1E9 387 aaKnown RBP12□□□□□ -0.49
IGHV4-28-201ENST00000390612 TULP2O00295 520 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 XPO1O14980 1071 aaKnown RBP12□□□□□ -0.49
IGHV4-28-201ENST00000390612 LAMTOR5O43504 91 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 GABBR2O75899 941 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 PAPSS2O95340 614 aaPredicted RBP12□□□□□ -0.49
IGHV4-28-201ENST00000390612 TBX18O95935 607 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 PSEN1P49768 467 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 GALK1P51570 392 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 BCAT1P54687 386 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 PDE4CQ08493 712 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 LRRC32Q14392 662 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 CNGA2Q16280 664 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 SGO2Q562F6 1265 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 NAIF1Q69YI7 327 aaPredicted RBP12□□□□□ -0.49
IGHV4-28-201ENST00000390612 SMYD5Q6GMV2 418 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 DPY19L2P1Q6NXN4 242 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 TMEM270Q6UE05 265 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 LCLAT1Q6UWP7 414 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 RRAGAQ7L523 313 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 BHLHA9Q7RTU4 235 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 PPM1KQ8N3J5 372 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 SPEM1Q8N4L4 309 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 CPA6Q8N4T0 437 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 ZBTB44Q8NCP5 570 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 EZH1Q92800 747 aaPredicted RBP12□□□□□ -0.49
IGHV4-28-201ENST00000390612 WBP2Q969T9 261 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 RBM12Q9NTZ6 932 aaKnown RBP12□□□□□ -0.49
IGHV4-28-201ENST00000390612 CFAP97Q9P2B7 532 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 TSPAN16Q9UKR8 245 aa12□□□□□ -0.49
IGHV4-28-201ENST00000390612 A0A1W2PQH9 124 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 SLC9A3R1O14745 358 aaPredicted RBP11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 NFATC1O95644 943 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 CYP17A1P05093 508 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 OPRD1P41143 372 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 PLA2G4AP47712 749 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 AMPD2Q01433 879 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 BST2Q10589 180 aaKnown RBP11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 GOLGA7BQ2TAP0 167 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 MIIPQ5JXC2 388 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 TRIM65Q6PJ69 517 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 RHBDF2Q6PJF5 856 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 Q6ZS52 159 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 HTR3DQ70Z44 454 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 SCML4Q8N228 414 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 SLC35F5Q8WV83 523 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 KCTD13Q8WZ19 329 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 OTUB2Q96DC9 234 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 SEMA4AQ9H3S1 761 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 C2orf42Q9NWW7 574 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 TBC1D14Q9P2M4 693 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 PCDHB4Q9Y5E5 795 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 GON4LQ3T8J9 2241 aa11.99□□□□□ -0.49
IGHV4-28-201ENST00000390612 A0A0A0MRY4 1105 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 CHURC1-FNTBB4DL54 471 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 LILRB5O75023 590 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 EGFP01133 1207 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 SETSIPP0DME0 302 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 CHRM1P11229 460 aaPredicted RBP11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 RARGP13631 454 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 CD19P15391 556 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms