RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 ZNF280DQ6N043 979 aa12.71□□□□□ -0.37
KCNQ3-201ENST00000388996 PCSK9Q8NBP7 692 aaKnown RBP12.71□□□□□ -0.37
KCNQ3-201ENST00000388996 C3orf20Q8ND61 904 aa12.71□□□□□ -0.37
KCNQ3-201ENST00000388996 THAP11Q96EK4 314 aa12.71□□□□□ -0.37
KCNQ3-201ENST00000388996 MED13LQ71F56 2210 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 SNTNA6NMZ2 147 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 CTDNEP1O95476 244 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 PSMA3P25788 255 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 ANXA11P50995 505 aaKnown RBP12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 CCNG1P51959 295 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 ATP8B4Q8TF62 1192 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 DNAJC9Q8WXX5 260 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 FAM111AQ96PZ2 611 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 CCDC3Q9BQI4 270 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 CBWD1Q9BRT8 395 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 ADGRE3Q9BY15 652 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 NCF1BA6NI72 391 aaPredicted RBP12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 NCF1CA8MVU1 366 aaPredicted RBP12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 CYTH3O43739 400 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 NCF1P14598 390 aaPredicted RBP12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 NAT9Q9BTE0 207 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 SYNCRIPO60506 623 aaKnown RBP12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 CCDC159P0C7I6 412 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 SAMD3Q8N6K7 520 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 NOA1Q8NC60 698 aaKnown RBP12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 CPB2Q96IY4 423 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 ZNF518BQ9C0D4 1074 aa12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 DRG1Q9Y295 367 aaKnown RBP12.71□□□□□ -0.38
KCNQ3-201ENST00000388996 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ASCC2Q9H1I8 757 aaPredicted RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 PCDHB12Q9Y5F1 795 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 F8VZ95 297 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 GZMAP12544 262 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 STIP1P31948 543 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 GJB7Q6PEY0 223 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ARRDC4Q8NCT1 418 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ECSITQ9BQ95 431 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 COPS7BQ9H9Q2 264 aaPredicted RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ZSCAN32Q9NX65 697 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 PARP4Q9UKK3 1724 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 DARSP14868 501 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 KPNA1P52294 538 aaPredicted RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 TBL3Q12788 808 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 DDX39BQ13838 428 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ERO1BQ86YB8 467 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 OR2W6PQ8NHA6 318 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 UBXN6Q9BZV1 441 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 NT5MQ9NPB1 228 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 GRK3P35626 688 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 CAP2P40123 477 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 DEFA1P59665 94 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 DEFA3P59666 94 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 LRRC8DQ7L1W4 858 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 OPTNQ96CV9 577 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 GMCL1Q96IK5 515 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 TAAR1Q96RJ0 339 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 CAPN10Q9HC96 672 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 F8W810 466 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 CLK1P49759 484 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 SLC16A1P53985 500 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ITIH5Q86UX2 942 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 CCDC126Q96EE4 140 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 GPRC5CQ9NQ84 441 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ITGA11Q9UKX5 1188 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 CEMIPQ8WUJ3 1361 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 FDPSP14324 419 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 TCF3P15923 654 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 WDR49Q8IV35 697 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 TMEM245Q9H330 911 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 SCN1AP35498 2009 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 STAU1O95793 577 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 CKBP12277 381 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 LAMTOR4Q0VGL1 99 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 EPS8L3Q8TE67 593 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 CASKIN2Q8WXE0 1202 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 AGO4Q9HCK5 861 aaKnown RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 LZTS3O60299 673 aaPredicted RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ATXN3P54252 364 aaPredicted RBP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 KLC1Q07866 573 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 DENND1BQ6P3S1 775 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 CCNJLQ8IV13 435 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 PXMP2Q9NR77 195 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 AP4E1Q9UPM8 1137 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 CRTAMO95727 393 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 THP07101 528 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 ADIGQ0VDE8 80 aa12.7□□□□□ -0.38
KCNQ3-201ENST00000388996 VDRP11473 427 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 BFSP2Q13515 415 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 PWP1Q13610 501 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 PDIA6Q15084 440 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 LRRC40Q9H9A6 602 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 PYGMP11217 842 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 SLC26A2P50443 739 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 SLC9A5Q14940 896 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 TEX9Q8N6V9 391 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 POLLQ9UGP5 575 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 NCAM2O15394 837 aa12.69□□□□□ -0.38
KCNQ3-201ENST00000388996 ALBP02768 609 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms