RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 LRRC52Q8N7C0 313 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 GPATCH11Q8N954 259 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 ANKLE1Q8NAG6 615 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 MRRFQ96E11 262 aaKnown RBP15.58■□□□□ 0.08
SCFD2-201ENST00000388940 L3MBTL3Q96JM7 780 aaPredicted RBP15.58■□□□□ 0.08
SCFD2-201ENST00000388940 CXorf56Q9H5V9 222 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 PCDH18Q9HCL0 1135 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 ATP5HO75947 161 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 SDC4P31431 198 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 RGS7P49802 495 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 WLSQ5T9L3 541 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 C4orf22Q6V702 233 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 IGDCC3Q8IVU1 814 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 ZNF75CPQ92670 426 aaPredicted RBP15.58■□□□□ 0.08
SCFD2-201ENST00000388940 KLHL29Q96CT2 875 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 SNX27Q96L92 541 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 MRPL45Q9BRJ2 306 aaKnown RBP15.58■□□□□ 0.08
SCFD2-201ENST00000388940 ZNF670Q9BS34 389 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 ADAMTS10Q9H324 1103 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 CYLDQ9NQC7 956 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 CHMP2BQ9UQN3 213 aa15.58■□□□□ 0.08
SCFD2-201ENST00000388940 PDCD11Q14690 1871 aaKnown RBP15.57■□□□□ 0.08
SCFD2-201ENST00000388940 IQANK1A0A1B0GTG1 560 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 RRN3P2A6NIE6 340 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 UNCXA6NJT0 531 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 IGF2BP3O00425 579 aaKnown RBP eCLIP15.57■□□□□ 0.08
SCFD2-201ENST00000388940 PIK3R2O00459 728 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 GRAP2O75791 330 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 MMP3P08254 477 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 ALADP13716 330 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 HOXA11P31270 313 aaPredicted RBP15.57■□□□□ 0.08
SCFD2-201ENST00000388940 SCNN1AP37088 669 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 KCNJ2P63252 427 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 PCBP1Q15365 356 aaKnown RBP eCLIP15.57■□□□□ 0.08
SCFD2-201ENST00000388940 CDO1Q16878 200 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 DUSP28Q4G0W2 176 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 SPDYAQ5MJ70 313 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 C1orf228Q6PIY5 440 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 ARCQ7LC44 396 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 ZNF276Q8N554 614 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 TAB3Q8N5C8 712 aaPredicted RBP15.57■□□□□ 0.08
SCFD2-201ENST00000388940 ZNF398Q8TD17 642 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 FAM172AQ8WUF8 416 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 SLC44A1Q8WWI5 657 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 SPOCK2Q92563 424 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 VPS11Q9H270 941 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 NOD2Q9HC29 1040 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 HESX1Q9UBX0 185 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 SNX9Q9Y5X1 595 aa15.57■□□□□ 0.08
SCFD2-201ENST00000388940 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 FAM155BO75949 473 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 TOMM70O94826 608 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 UNC5CO95185 931 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 NPTXRO95502 500 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 ALDH3A1P30838 453 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 PTPN9P43378 593 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 NRLP54845 237 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 BCAR1P56945 870 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 ATP11AP98196 1134 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 SETDB1Q15047 1291 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 PREPLQ4J6C6 727 aaPredicted RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 SLC27A1Q6PCB7 646 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 ACOT1Q86TX2 421 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 BEST2Q8NFU1 509 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 PCDH19Q8TAB3 1148 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 SLC10A4Q96EP9 437 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 ZMAT2Q96NC0 199 aaKnown RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 SNRNP25Q9BV90 132 aaKnown RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 SLCO1B3Q9NPD5 702 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 MORF4L1Q9UBU8 362 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 TCRBV9S1A1TA0A576 114 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 PAPSS1O43252 624 aaPredicted RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 GABBR2O75899 941 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 DCTN3O75935 186 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 EPHX2P34913 555 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 RPL34P49207 117 aaKnown RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 ZNF200P98182 395 aaPredicted RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 SLC18A2Q05940 514 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 SCYL2Q6P3W7 929 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 ALKAL1Q6UXT8 129 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 TCP10LQ8TDR4 215 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 C10orf82Q8WW14 230 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 CENPIQ92674 756 aaPredicted RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 C11orf84Q9BUA3 381 aaPredicted RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 GCOM2Q9BZD3 368 aaPredicted RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 NGRNQ9NPE2 291 aaKnown RBP15.56■□□□□ 0.08
SCFD2-201ENST00000388940 TXLNGQ9NUQ3 528 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 SNTG2Q9NY99 539 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 NME7Q9Y5B8 376 aa15.56■□□□□ 0.08
SCFD2-201ENST00000388940 KBTBD13C9JR72 458 aa15.55■□□□□ 0.08
SCFD2-201ENST00000388940 KCNN4O15554 427 aa15.55■□□□□ 0.08
SCFD2-201ENST00000388940 CAPN15O75808 1086 aa15.55■□□□□ 0.08
SCFD2-201ENST00000388940 ECM2O94769 699 aaPredicted RBP15.55■□□□□ 0.08
SCFD2-201ENST00000388940 SMPD1P17405 629 aa15.55■□□□□ 0.08
SCFD2-201ENST00000388940 DGKDQ16760 1214 aa15.55■□□□□ 0.08
SCFD2-201ENST00000388940 SH2D5Q6ZV89 423 aa15.55■□□□□ 0.08
SCFD2-201ENST00000388940 OTOAQ7RTW8 1153 aa15.55■□□□□ 0.08
SCFD2-201ENST00000388940 PNMA8AQ86V59 439 aaPredicted RBP15.55■□□□□ 0.08
SCFD2-201ENST00000388940 SCUBE3Q8IX30 993 aa15.55■□□□□ 0.08
SCFD2-201ENST00000388940 MYLK2Q9H1R3 596 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms