RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 PCBP1Q15365 356 aaKnown RBP eCLIP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 CDSNQ15517 529 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 TAF5Q15542 800 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 TPSAB1Q15661 275 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 CCDC27Q2M243 656 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 CTU2Q2VPK5 515 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 EDRF1Q3B7T1 1238 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 HSF5Q4G112 596 aaPredicted RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 RRP12Q5JTH9 1297 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 PERM1Q5SV97 790 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 C6orf52Q5T4I8 152 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 LCE2AQ5TA79 106 aaPredicted RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 ATP1A1-AS1Q5TC04 95 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 VWA5B1Q5TIE3 1220 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 PRAMEF17Q5VTA0 474 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 IER5Q5VY09 327 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 PDZD4Q76G19 769 aaPredicted RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 STRADAQ7RTN6 431 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 PEG10Q86TG7 708 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 ZDHHC17Q8IUH5 632 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 GPIHBP1Q8IV16 184 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 APLFQ8IW19 511 aaPredicted RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 FAM186BQ8IYM0 893 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 RASEFQ8IZ41 740 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 CPXCR1Q8N123 301 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 TXNDC5Q8NBS9 432 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 RNF169Q8NCN4 708 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 IL17REQ8NFR9 667 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 PCDH19Q8TAB3 1148 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 WDR48Q8TAF3 677 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 FAM110DQ8TAY7 271 aaPredicted RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 DNAJB14Q8TBM8 379 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 ACER1Q8TDN7 264 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 GRHL3Q8TE85 626 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 SCFD2Q8WU76 684 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 FAR1Q8WVX9 515 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 NLRP7Q8WX94 980 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 LINC01599Q8WXQ3 324 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 COPS5Q92905 334 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 CD101Q93033 1021 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 MKL1Q969V6 931 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 PMEPA1Q969W9 287 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 TMEM159Q96B96 161 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 CHFRQ96EP1 664 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 TOE1Q96GM8 510 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 ZSWIM3Q96MP5 696 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 AGAP3Q96P47 875 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 NOX5Q96PH1 765 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 FCRL4Q96PJ5 515 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 PUS7Q96PZ0 661 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 MPHOSPH6Q99547 160 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 PIP5K1AQ99755 562 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 OLFM1Q99784 485 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 B9D2Q9BPU9 175 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 NUDT9Q9BW91 350 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 MRPL9Q9BYD2 267 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 KRTAP2-4Q9BYR9 128 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 TRIM7Q9C029 511 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 TTYH3Q9C0H2 523 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 SLITRK2Q9H156 845 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 EBF3Q9H4W6 596 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 ELAC1Q9H777 363 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 AGO3Q9H9G7 860 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 KCNK13Q9HB14 408 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 SP110Q9HB58 689 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 RXFP1Q9HBX9 757 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 KCNJ16Q9NPI9 418 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 A1CFQ9NQ94 594 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 ACSS2Q9NR19 701 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 GDF3Q9NR23 364 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 RGS18Q9NS28 235 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 AURKAIP1Q9NWT8 199 aaPredicted RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 DDX43Q9NXZ2 648 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 SELENONQ9NZV5 590 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 MRPL15Q9P015 296 aaKnown RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 AKAP7Q9P0M2 348 aaPredicted RBP1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 CALCOCO1Q9P1Z2 691 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 SQORQ9Y6N5 450 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 SLC4A4Q9Y6R1 1079 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 FREM1Q5H8C1 2179 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 FER1L5A0AVI2 2057 aa1.22□□□□□ -2.21
RNU6-42P-201ENST00000384165 WDR81Q562E7 1941 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 FREM3P0C091 2139 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 MAGEB6P1A0A0J9YX57 407 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 A0A0U1RQS6 177 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 MBD3L4A6NDZ8 208 aaPredicted RBP1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 TCAF2A6NFQ2 919 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 MBD3L5A6NJ08 208 aaPredicted RBP1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 B4DLN1 442 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 HAS3O00219 553 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 DDX3XO00571 662 aaKnown RBP eCLIP1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 TRIM38O00635 465 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 VILLO15195 856 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 DHHO43323 396 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 PPFIA4O75335 1185 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 CDK2AP2O75956 126 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 GH1P01241 217 aa1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 HSP90AA1P07900 732 aaKnown RBP1.21□□□□□ -2.22
RNU6-42P-201ENST00000384165 GALTP07902 379 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms