RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 GSDMBQ8TAX9 411 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 SLCO2A1Q92959 643 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 EURLQ9NYK6 297 aa14.41□□□□□ -0.1
SDC1-202ENST00000381150 HNRNPDLO14979 420 aaKnown RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 DKC1O60832 514 aaKnown RBP eCLIP14.4□□□□□ -0.1
SDC1-202ENST00000381150 ITGA2BP08514 1039 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 VCLP18206 1134 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 GRIA2P42262 883 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 CYP24A1Q07973 514 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 TRMT5Q32P41 509 aaKnown RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 BRDTQ58F21 947 aaPredicted RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 ANGEL2Q5VTE6 544 aaKnown RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 POLNQ7Z5Q5 900 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 CRLF3Q8IUI8 442 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 LENG1Q96BZ8 264 aaPredicted RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 CALN1Q9BXU9 219 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 ARHGAP28Q9P2N2 729 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 MAD1L1Q9Y6D9 718 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 CLUHO75153 1309 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 ZNF541Q9H0D2 1346 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 MYH9P35579 1960 aaKnown RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 IQANK1A0A1B0GTG1 560 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 ABHD2P08910 425 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 RAG1P15918 1043 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 PDE1BQ01064 536 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 MROH9Q5TGP6 573 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 C15orf39Q6ZRI6 1047 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 CDHR3Q6ZTQ4 885 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 SKA1Q96BD8 255 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 SRPK1Q96SB4 655 aaKnown RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 MIS12Q9H081 205 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 CYLDQ9NQC7 956 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 SLC24A2Q9UI40 661 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 ALOX15BO15296 676 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 CFLARO15519 480 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 PEX1O43933 1283 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 ADCY3O60266 1144 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 DGAT1O75907 488 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 CLPTM1O96005 669 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 ELK3P41970 407 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 MAGEA10P43363 369 aaPredicted RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 ACTR2P61160 394 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 FSTL1Q12841 308 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 SH2D4BQ5SQS7 431 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 SDCCAG8Q86SQ7 713 aaPredicted RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 ZNF516Q92618 1163 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 ATP6V0A1Q93050 837 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 E2F7Q96AV8 911 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 PRPF18Q99633 342 aaKnown RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 VPS11Q9H270 941 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 JPH1Q9HDC5 661 aaPredicted RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 CYP26B1Q9NR63 512 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 SLC9A2Q9UBY0 812 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 FAF1Q9UNN5 650 aaPredicted RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 RPL26L1Q9UNX3 145 aaKnown RBP14.4□□□□□ -0.1
SDC1-202ENST00000381150 WDR90Q96KV7 1748 aa14.4□□□□□ -0.1
SDC1-202ENST00000381150 PSAPP07602 524 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 GTF2H1P32780 548 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 CLDN10P78369 228 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 ENPEPQ07075 957 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 LSAMPQ13449 338 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 TTLL12Q14166 644 aaPredicted RBP14.39□□□□□ -0.11
SDC1-202ENST00000381150 KLHL38Q2WGJ6 581 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 CMPK2Q5EBM0 449 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 EFHC1Q5JVL4 640 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 CYP4A22Q5TCH4 519 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 CCDC33Q8N5R6 958 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 ACTL9Q8TC94 416 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 ANLNQ9NQW6 1124 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 TAGLN3Q9UI15 199 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 AFG3L2Q9Y4W6 797 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 CST8O60676 142 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 LYPLA1O75608 230 aaPredicted RBP14.39□□□□□ -0.11
SDC1-202ENST00000381150 TM7SF2O76062 418 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 ATG7O95352 703 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 WEE2P0C1S8 567 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 MORF4L2Q15014 288 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 DHDDSQ86SQ9 333 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 ZBTB46Q86UZ6 589 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 BANPQ8N9N5 519 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 TRPM4Q8TD43 1214 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 KCNN1Q92952 543 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 TEX13BQ9BXU2 312 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 PHF24Q9UPV7 400 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 HEMK1Q9Y5R4 338 aaPredicted RBP14.39□□□□□ -0.11
SDC1-202ENST00000381150 KBTBD13C9JR72 458 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 GARTP22102 1010 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 PMLP29590 882 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 GNA15P30679 374 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 ADARP55265 1226 aaKnown RBP14.39□□□□□ -0.11
SDC1-202ENST00000381150 ACTR3P61158 418 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 OTUD4Q01804 1114 aaKnown RBP14.39□□□□□ -0.11
SDC1-202ENST00000381150 PRKCEQ02156 737 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 KLF1Q13351 362 aaPredicted RBP14.39□□□□□ -0.11
SDC1-202ENST00000381150 HPS6Q86YV9 775 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 TRIM56Q9BRZ2 755 aaKnown RBP14.39□□□□□ -0.11
SDC1-202ENST00000381150 WWP1Q9H0M0 922 aa14.39□□□□□ -0.11
SDC1-202ENST00000381150 LIN28AQ9H9Z2 209 aaKnown RBP14.39□□□□□ -0.11
SDC1-202ENST00000381150 MRPL47Q9HD33 250 aaKnown RBP14.39□□□□□ -0.11
SDC1-202ENST00000381150 POLR2AP24928 1970 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms