RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 LENG1Q96BZ8 264 aaPredicted RBP13.16□□□□□ -0.3
VPS16-202ENST00000380445 ZNF670Q9BS34 389 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 KLK14Q9P0G3 267 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 IPPQ9Y573 584 aa13.16□□□□□ -0.3
VPS16-202ENST00000380445 GOLGA6L7A0A1B0GV03 622 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 RASA4BC9J798 803 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 H7C0C1 242 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 M0QZ92 97 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 RASA4O43374 803 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 VIMP08670 466 aaKnown RBP13.15□□□□□ -0.3
VPS16-202ENST00000380445 PDGFRBP09619 1106 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 AKR1A1P14550 325 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 TSHRP16473 764 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 PSMC4P43686 418 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 ATP5OP48047 213 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 RPL34P49207 117 aaKnown RBP13.15□□□□□ -0.3
VPS16-202ENST00000380445 BEX3Q00994 111 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 RASAL3Q86YV0 1011 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 SRRM1Q8IYB3 904 aaKnown RBP13.15□□□□□ -0.3
VPS16-202ENST00000380445 TOP6BLQ8N6T0 577 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 CCDC197Q8NCU1 140 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 KHSRPQ92945 711 aaKnown RBP eCLIP13.15□□□□□ -0.3
VPS16-202ENST00000380445 MIEF2Q96C03 454 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 DPEP3Q9H4B8 488 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 NME7Q9Y5B8 376 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 PDCD11Q14690 1871 aaKnown RBP13.15□□□□□ -0.3
VPS16-202ENST00000380445 TOMM70O94826 608 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 ZFXP17010 805 aaPredicted RBP13.15□□□□□ -0.3
VPS16-202ENST00000380445 ADORA2BP29275 332 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 HOXC8P31273 242 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 BCAR1P56945 870 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 BASP1P80723 227 aaKnown RBP13.15□□□□□ -0.3
VPS16-202ENST00000380445 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
VPS16-202ENST00000380445 TMED2Q15363 201 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 ANKRD20A8PQ5CZ79 823 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 EFHC1Q5JVL4 640 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 TWF2Q6IBS0 349 aaKnown RBP13.15□□□□□ -0.3
VPS16-202ENST00000380445 LIMS2Q7Z4I7 341 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 PPP1R13LQ8WUF5 828 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 MAML1Q92585 1016 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 FRMD8Q9BZ67 464 aaPredicted RBP13.15□□□□□ -0.3
VPS16-202ENST00000380445 PAK5Q9P286 719 aa13.15□□□□□ -0.3
VPS16-202ENST00000380445 E7ESA3 106 aa13.15□□□□□ -0.31
VPS16-202ENST00000380445 IFNAR2P48551 515 aa13.15□□□□□ -0.31
VPS16-202ENST00000380445 ZNF200P98182 395 aaPredicted RBP13.15□□□□□ -0.31
VPS16-202ENST00000380445 FASTKD3Q14CZ7 662 aaKnown RBP13.15□□□□□ -0.31
VPS16-202ENST00000380445 C4orf22Q6V702 233 aa13.15□□□□□ -0.31
VPS16-202ENST00000380445 ZC3H18Q86VM9 953 aaKnown RBP13.15□□□□□ -0.31
VPS16-202ENST00000380445 TAX1BP1Q86VP1 789 aa13.15□□□□□ -0.31
VPS16-202ENST00000380445 HACE1Q8IYU2 909 aa13.15□□□□□ -0.31
VPS16-202ENST00000380445 ADGRF2Q8IZF7 708 aa13.15□□□□□ -0.31
VPS16-202ENST00000380445 CYP4X1Q8N118 509 aa13.15□□□□□ -0.31
VPS16-202ENST00000380445 SNRNP25Q9BV90 132 aaKnown RBP13.15□□□□□ -0.31
VPS16-202ENST00000380445 PCDH18Q9HCL0 1135 aa13.15□□□□□ -0.31
VPS16-202ENST00000380445 POC1B-GALNT4F8VUJ3 575 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 GOLGA8MH3BSY2 632 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 KIF3CO14782 793 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 TNPO2O14787 897 aaKnown RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 CCDC130P13994 396 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 LRPAP1P30533 357 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 STX2P32856 288 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 RNASELQ05823 741 aaKnown RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 SLC9A4Q6AI14 798 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 RSPH3Q86UC2 560 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 PALM2Q8IXS6 379 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 LRRC34Q8IZ02 419 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 PLD5Q8N7P1 536 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 C10orf88Q9H8K7 445 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 ZFYVE28Q9HCC9 887 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 SLC38A7Q9NVC3 462 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 XPO7Q9UIA9 1087 aaKnown RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 DUSP11O75319 330 aaKnown RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 FSBPO95073 299 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 FGFR1P11362 822 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 WARSP23381 471 aaKnown RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 IL4RP24394 825 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 LMO2P25791 158 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 SLC18A1P54219 525 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 HDAC4P56524 1084 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 GEMIN4P57678 1058 aaKnown RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 LILRA4P59901 499 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 ITIH4Q14624 930 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 KLHL38Q2WGJ6 581 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 C1orf228Q6PIY5 440 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 NPNTQ6UXI9 565 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 PIGWQ7Z7B1 504 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 IFNL1Q8IU54 200 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 ANKRD42Q8N9B4 389 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 SMG8Q8ND04 991 aaKnown RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 MGARPQ8TDB4 240 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 CKAP2Q8WWK9 683 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 CENPIQ92674 756 aaPredicted RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 PLCD4Q9BRC7 762 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 PSMC3IPQ9P2W1 217 aaPredicted RBP13.14□□□□□ -0.31
VPS16-202ENST00000380445 GJD2Q9UKL4 321 aa13.14□□□□□ -0.31
VPS16-202ENST00000380445 DOCK3Q8IZD9 2030 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms