RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SMARCD1Q96GM5 515 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 MAGEF1Q9HAY2 307 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 KRT82Q9NSB4 513 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 DEC1Q9P2X7 70 aa24.49■■□□□ 1.51
U2AF1-202ENST00000380276 C1QTNF9BB2RNN3 333 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 K7ELQ4 463 aaPredicted RBP24.48■■□□□ 1.51
U2AF1-202ENST00000380276 ADAM23O75077 832 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 CFIP05156 583 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 PROS1P07225 676 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 C1QTNF9P0C862 333 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 ORC1Q13415 861 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 NCOA4Q13772 614 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 KNOP1Q1ED39 458 aaKnown RBP24.48■■□□□ 1.51
U2AF1-202ENST00000380276 CNNM4Q6P4Q7 775 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 UNQ6494/PRO21346Q6UXR6 183 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 NUDT18Q6ZVK8 323 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 TRMT11Q7Z4G4 463 aaKnown RBP24.48■■□□□ 1.51
U2AF1-202ENST00000380276 ACOT1Q86TX2 421 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 ERLEC1Q96DZ1 483 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 ZFRQ96KR1 1074 aaKnown RBP24.48■■□□□ 1.51
U2AF1-202ENST00000380276 GZF1Q9H116 711 aaPredicted RBP24.48■■□□□ 1.51
U2AF1-202ENST00000380276 FAM13BQ9NYF5 915 aa24.48■■□□□ 1.51
U2AF1-202ENST00000380276 CGNQ9P2M7 1197 aaKnown RBP24.48■■□□□ 1.51
U2AF1-202ENST00000380276 MBD1Q9UIS9 605 aaPredicted RBP24.48■■□□□ 1.51
U2AF1-202ENST00000380276 TNFRSF10BO14763 440 aa24.47■■□□□ 1.51
U2AF1-202ENST00000380276 TULP3O75386 442 aa24.47■■□□□ 1.51
U2AF1-202ENST00000380276 CEACAM1P13688 526 aa24.47■■□□□ 1.51
U2AF1-202ENST00000380276 SYT12Q8IV01 421 aa24.47■■□□□ 1.51
U2AF1-202ENST00000380276 DEFB119Q8N690 84 aa24.47■■□□□ 1.51
U2AF1-202ENST00000380276 PLEKHO2Q8TD55 490 aa24.47■■□□□ 1.51
U2AF1-202ENST00000380276 SPHK2Q9NRA0 654 aa24.47■■□□□ 1.51
U2AF1-202ENST00000380276 EVLQ9UI08 416 aaPredicted RBP24.47■■□□□ 1.51
U2AF1-202ENST00000380276 LRRIQ3A6PVS8 624 aaPredicted RBP24.46■■□□□ 1.51
U2AF1-202ENST00000380276 ZBTB24O43167 697 aaPredicted RBP24.46■■□□□ 1.51
U2AF1-202ENST00000380276 HOXC11O43248 304 aaPredicted RBP24.46■■□□□ 1.51
U2AF1-202ENST00000380276 CCDC130P13994 396 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 HOXB2P14652 356 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 ENGP17813 658 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 CSRP1P21291 193 aaKnown RBP24.46■■□□□ 1.51
U2AF1-202ENST00000380276 ATXN3P54252 364 aaPredicted RBP24.46■■□□□ 1.51
U2AF1-202ENST00000380276 CUL4BQ13620 913 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 MAP7D1Q3KQU3 841 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 PAQR9Q6ZVX9 377 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 TMEM25Q86YD3 366 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 C12orf56Q8IXR9 622 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 JAKMIP2Q96AA8 810 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 SDCBP2Q9H190 292 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 TMEM74BQ9NUR3 256 aa24.46■■□□□ 1.51
U2AF1-202ENST00000380276 A0A0A0MRY4 1105 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 TLR5O60602 858 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 TOP3BO95985 862 aaKnown RBP24.45■■□□□ 1.5
U2AF1-202ENST00000380276 P4HA1P13674 534 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 ME1P48163 572 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 AP3M2P53677 418 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 MAP3K7CLP57077 242 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 RPL6Q02878 288 aaKnown RBP24.45■■□□□ 1.5
U2AF1-202ENST00000380276 EHHADHQ08426 723 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 BMT2Q1RMZ1 405 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 GRAMD4Q6IC98 578 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 KIAA1211LQ6NV74 962 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 ETFBKMTQ8IXQ9 262 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 GRAMD1CQ8IYS0 662 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 CEP57L1Q8IYX8 460 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 PHTF2Q8N3S3 785 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 TERB1Q8NA31 727 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 GOLGA5Q8TBA6 731 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 WBP2Q969T9 261 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 GTPBP2Q9BX10 602 aaKnown RBP24.45■■□□□ 1.5
U2AF1-202ENST00000380276 SLC32A1Q9H598 525 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 VRTNQ9H8Y1 702 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 FSCN3Q9NQT6 498 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 FAM49BQ9NUQ9 324 aa24.45■■□□□ 1.5
U2AF1-202ENST00000380276 DNAJC17Q9NVM6 304 aaKnown RBP24.45■■□□□ 1.5
U2AF1-202ENST00000380276 RALYQ9UKM9 306 aaKnown RBP24.45■■□□□ 1.5
U2AF1-202ENST00000380276 PVALEFA0A1B0GWK0 134 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 NEDD8-MDP1E9PL57 170 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 TRIM24O15164 1050 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 AP5Z1O43299 807 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 CHRM1P11229 460 aaPredicted RBP24.44■■□□□ 1.5
U2AF1-202ENST00000380276 ITPKAP23677 461 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 DPP6P42658 865 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 TUBP50607 506 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 FUKQ8N0W3 1084 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 SLC2A14Q8TDB8 520 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 PARD3BQ8TEW8 1205 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 ADAM33Q9BZ11 813 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 COMMD8Q9NX08 183 aa24.44■■□□□ 1.5
U2AF1-202ENST00000380276 LSM7Q9UK45 103 aaKnown RBP24.44■■□□□ 1.5
U2AF1-202ENST00000380276 TNRC6BQ9UPQ9 1833 aaKnown RBP24.43■■□□□ 1.5
U2AF1-202ENST00000380276 LAMA1P25391 3075 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 ADORA2BP29275 332 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 NDST1P52848 882 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 GOLGA8FQ08AF8 430 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 GOLGA8DPQ0D2H9 430 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 SNX30Q5VWJ9 437 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 SDE2Q6IQ49 451 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 SLC36A4Q6YBV0 504 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 TPGS1Q6ZTW0 290 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 HDDC3Q8N4P3 179 aa24.43■■□□□ 1.5
U2AF1-202ENST00000380276 XPO6Q96QU8 1125 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms