RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 SIX6OS1Q8N1H7 587 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 FLCNQ8NFG4 579 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 MXD3Q9BW11 206 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 SP140LQ9H930 580 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 C12orf10Q9HB07 376 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 POLHQ9Y253 713 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 MYH3P11055 1940 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 UTYO14607 1347 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 LOC100653049A0A140TA62 436 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 M0QX08 132 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 MSI1O43347 362 aaKnown RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 TYROBPO43914 113 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 MAN1A2O60476 641 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 CCNT1O60563 726 aaKnown RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 KRT34O76011 436 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 BCL10O95999 233 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 TATP17735 454 aaPredicted RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 HSPA13P48723 471 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 FKBP3Q00688 224 aaKnown RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 NPTX1Q15818 432 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 IGSF11Q5DX21 431 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 SNAP47Q5SQN1 464 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 RSBN1Q5VWQ0 802 aaPredicted RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 NUDCD3Q8IVD9 361 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 ZC3H7AQ8IWR0 971 aaKnown RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 TRIM59Q8IWR1 403 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 ATG4AQ8WYN0 398 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 ARHGEF26Q96DR7 871 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 GANQ9H2C0 597 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 DDX28Q9NUL7 540 aaKnown RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 WDR70Q9NW82 654 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 CHORDC1Q9UHD1 332 aaPredicted RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 CDH22Q9UJ99 828 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 APOBEC2Q9Y235 224 aaKnown RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 RNF11Q9Y3C5 154 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 FRMPD4Q14CM0 1322 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 B8ZZF3 427 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 KRT8P05787 483 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 HOXB7P09629 217 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 CDH1P12830 882 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 UCHL3P15374 230 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 NAGAP17050 411 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 AQP5P55064 265 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 PRKCEQ02156 737 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 DGKDQ16760 1214 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 INSCQ1MX18 579 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 DENND5BQ6ZUT9 1274 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 LYSMD3Q7Z3D4 306 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 BTLAQ7Z6A9 289 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 DGKHQ86XP1 1220 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 SLC13A5Q86YT5 568 aaPredicted RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 ASCC1Q8N9N2 400 aaKnown RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 NEDD1Q8NHV4 660 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 ZFYVE19Q96K21 471 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 C1orf50Q9BV19 199 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 MTMR12Q9C0I1 747 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 NAA50Q9GZZ1 169 aaKnown RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 WWP1Q9H0M0 922 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 EHMT1Q9H9B1 1298 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 GPR108Q9NPR9 543 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 AVENQ9NQS1 362 aaPredicted RBP8.81□□□□□ -1
NHLRC3-201ENST00000379599 XPNPEP1Q9NQW7 623 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 CDH7Q9ULB5 785 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 ARHGAP26Q9UNA1 814 aa8.81□□□□□ -1
NHLRC3-201ENST00000379599 RIMS1Q86UR5 1692 aaKnown RBP8.8□□□□□ -1
NHLRC3-201ENST00000379599 ARHGEF35A5YM69 484 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 ATP5J2-PTCD1G3V325 749 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 H3BNH8 94 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 I3L4J1 428 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 NOP56O00567 594 aaKnown RBP8.8□□□□□ -1
NHLRC3-201ENST00000379599 CCNT2O60583 730 aaKnown RBP8.8□□□□□ -1
NHLRC3-201ENST00000379599 PTCD1O75127 700 aaKnown RBP8.8□□□□□ -1
NHLRC3-201ENST00000379599 KCNH1O95259 989 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 DBTP11182 482 aaKnown RBP8.8□□□□□ -1
NHLRC3-201ENST00000379599 HPCAL1P37235 193 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 PHKA1P46020 1223 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 RACK1P63244 317 aaKnown RBP8.8□□□□□ -1
NHLRC3-201ENST00000379599 GBE1Q04446 702 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 HSPA14Q0VDF9 509 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 PDIA2Q13087 525 aaKnown RBP8.8□□□□□ -1
NHLRC3-201ENST00000379599 IRF5Q13568 498 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 SPCS2Q15005 226 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 DLGAP5Q15398 846 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 Q3C1V9 767 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 INAVAQ3KP66 663 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 CAVIN4Q5BKX8 364 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 DALRD3Q5D0E6 543 aaKnown RBP8.8□□□□□ -1
NHLRC3-201ENST00000379599 RHBDF2Q6PJF5 856 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 ZNF786Q8N393 782 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 DPF3Q92784 378 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 C7orf25Q9BPX7 421 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 SLC2A11Q9BYW1 496 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.8□□□□□ -1
NHLRC3-201ENST00000379599 STN1Q9H668 368 aaKnown RBP8.8□□□□□ -1
NHLRC3-201ENST00000379599 POLE4Q9NR33 117 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 RIC8BQ9NVN3 520 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 B3GNT3Q9Y2A9 372 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 TRAF6Q9Y4K3 522 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 UGT2A1Q9Y4X1 527 aa8.8□□□□□ -1
NHLRC3-201ENST00000379599 FAM172BPA6NC97 362 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms