RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TPSD1Q9BZJ3 242 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 SUSD2Q9UGT4 822 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 DMGDHQ9UI17 866 aaKnown RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 ZNF214Q9UL59 606 aaPredicted RBP6.81□□□□□ -1.32
NEDD9-202ENST00000379446 SIT1Q9Y3P8 196 aa6.81□□□□□ -1.32
NEDD9-202ENST00000379446 OR6C75A6NL08 312 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PDE2AO00408 941 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PALMO75781 387 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 RHOBTB1O94844 696 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 RASGRP1O95267 797 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 ZBED1O96006 694 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 EPHB2P29323 1055 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 HALP42357 657 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PRAMEP78395 509 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 FOXM1Q08050 763 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 KNOP1Q1ED39 458 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 KIAA1211LQ6NV74 962 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 WDR59Q6PJI9 974 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PEX26Q7Z412 305 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 TTC7BQ86TV6 843 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 ALLCQ8N6M5 410 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SPATA4Q8NEY3 305 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 MGARPQ8TDB4 240 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 ARL8AQ96BM9 186 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SIPA1Q96FS4 1042 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 REEP2Q9BRK0 252 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 GOLPH3Q9H4A6 298 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 LMAN1LQ9HAT1 526 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 FAM86C1Q9NVL1 165 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 MARCH2Q9P0N8 246 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 ADGRA2Q96PE1 1338 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 TRDMT1O14717 391 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 MAP2K7O14733 419 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 RRP8O43159 456 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 EOMESO95936 686 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 NOP14P78316 857 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 NSUN2Q08J23 767 aaKnown RBP eCLIP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 FOXC1Q12948 553 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SLC12A1Q13621 1099 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 RPS6KA1Q15418 735 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PLEKHG6Q3KR16 790 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 RNF43Q68DV7 783 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 UNC13DQ70J99 1090 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 BZW1Q7L1Q6 419 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 LPCAT2Q7L5N7 544 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 EXT2Q93063 718 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 MKL1Q969V6 931 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 TRIM11Q96F44 468 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 VPS50Q96JG6 964 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 TRIM56Q9BRZ2 755 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 DPEP2Q9H4A9 486 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 WDCPQ9H6R7 721 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 RAB21Q9UL25 225 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SNX12Q9UMY4 172 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 TNFSF13BQ9Y275 285 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 Q9Y3F1 56 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 CFAP69A5D8W1 941 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SHISA7A6NL88 538 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SPATA31C2B4DYI2 1134 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 H3BRJ5 948 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 MCF2LO15068 1137 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SLC37A4O43826 429 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 H2AFZP0C0S5 128 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 MYBL2P10244 700 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 MAP4P27816 1152 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SERPINB6P35237 376 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 TBX4P57082 545 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 RBBP5Q15291 538 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 AMZ1Q400G9 498 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 BROXQ5VW32 411 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PDE12Q6L8Q7 609 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.8□□□□□ -1.321e-6■■■■□ 24
NEDD9-202ENST00000379446 CAPN12Q6ZSI9 719 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 H2AFVQ71UI9 128 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 C4orf19Q8IY42 314 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 LGI2Q8N0V4 545 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 GLIS3Q8NEA6 775 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 EGFL8Q99944 293 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 CENPKQ9BS16 269 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 DPH5Q9H2P9 285 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SEMA6BQ9H3T3 888 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 C17orf75Q9HAS0 396 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 LATS2Q9NRM7 1088 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 KBTBD4Q9NVX7 518 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 TBX20Q9UMR3 447 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PIAS3Q9Y6X2 628 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 CCDC78A2IDD5 438 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 KHNYNO15037 678 aaKnown RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 EPHB6O15197 1021 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 MEFVO15553 781 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SYPP08247 313 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PDGFRAP16234 1089 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 RPA1P27694 616 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SMARCA1P28370 1054 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 CYP4F8P98187 520 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 SEMG2Q02383 582 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PCSK7Q16549 785 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PHF19Q5T6S3 580 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 CCNI2Q6ZMN8 369 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PDZD8Q8NEN9 1154 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms