RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CRELD1Q96HD1 420 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 MANSC1Q9H8J5 431 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 PLOD3O60568 738 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 NDUFS2O75306 463 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 ZNF806P0C7X5 589 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 IGFBP4P22692 258 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 GLRBP48167 497 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 PROSER3Q2NL68 480 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 ATP6AP1LQ52LC2 224 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 PDCD4Q53EL6 469 aaKnown RBP13.68□□□□□ -0.22
HIPK3-202ENST00000379016 NLGN1Q8N2Q7 840 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 GPRC5DQ9NZD1 345 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 EHD3Q9NZN3 535 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 CLEC4AQ9UMR7 237 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 TRIM38O00635 465 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 MED26O95402 600 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
HIPK3-202ENST00000379016 GNA13Q14344 377 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 AGAP9Q5VTM2 703 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 SKA1Q96BD8 255 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 C12orf4Q9NQ89 552 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 AMACRQ9UHK6 382 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 GPN3Q9UHW5 284 aaPredicted RBP13.68□□□□□ -0.22
HIPK3-202ENST00000379016 L1RE1Q9UN81 338 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 PLA2G4CQ9UP65 541 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 CDY2AQ9Y6F7 541 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 CDY1Q9Y6F8 540 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 EMSYQ7Z589 1322 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
HIPK3-202ENST00000379016 LOC100506127A0A0U1RQW1 187 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 OPLAHO14841 1288 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 CYP26A1O43174 497 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 PDGFRAP16234 1089 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 ALDH3A2P51648 485 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 ACAP2Q15057 778 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 OTUD3Q5T2D3 398 aaPredicted RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 MYO1HQ8N1T3 1032 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 NOS1APO75052 506 aaPredicted RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 CHN1P15882 459 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 ERCC2P18074 760 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 OR2L5Q8NG80 312 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 LRRC4BQ9NT99 713 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 SUCOQ9UBS9 1254 aaKnown RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 UBE2QL1A1L167 161 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 POTEMA6NI47 508 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 PCP11498 1178 aaKnown RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 CKBP12277 381 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 PRKAG1P54619 331 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 TBC1D25Q3MII6 688 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 RNASE12Q5GAN4 147 aaKnown RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 CBWD2Q8IUF1 395 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 ZNF615Q8N8J6 731 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 CENPIQ92674 756 aaPredicted RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 AAASQ9NRG9 546 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 LEMD3Q9Y2U8 911 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 KDM5BQ9UGL1 1544 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 TTC34A8MYJ7 566 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 SNAP23O00161 211 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 AKT2P31751 481 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 INTS2Q9H0H0 1204 aaKnown RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 H2AFXP16104 143 aaPredicted RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 MAPK1P28482 360 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 ACOT2P49753 483 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 IST1P53990 364 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 MAGEE2Q8TD90 523 aaPredicted RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 GPER1Q99527 375 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 KIAA1257Q9ULG3 409 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 PCDHB6Q9Y5E3 794 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 CCDC163A0A0D9SF12 145 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 DNAJB2P25686 324 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 IRX1P78414 480 aaPredicted RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 PYDC2Q56P42 97 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 KLHL23Q8NBE8 558 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 E2F7Q96AV8 911 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 RNF26Q9BY78 433 aaPredicted RBP13.67□□□□□ -0.22
HIPK3-202ENST00000379016 MIR1-1HGQ9H1L0 117 aa13.67□□□□□ -0.22
HIPK3-202ENST00000379016 TRPC5OSA6NMA1 111 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 ZNF208O43345 1280 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 MMP10P09238 476 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 LRPAP1P30533 357 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 CDK8P49336 464 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 GALK1P51570 392 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 PLD1Q13393 1074 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 STAT4Q14765 748 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 USF2Q15853 346 aaPredicted RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 RASGRP2Q7LDG7 609 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 CLPBQ9H078 707 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 DCLK1O15075 740 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 BCL10O95999 233 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 TARSP26639 723 aaKnown RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 GSTM5P46439 218 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 NEDD8Q15843 81 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 ZCWPW2Q504Y3 356 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 IER5Q5VY09 327 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 TSHZ1Q6ZSZ6 1077 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 RPH3AQ9Y2J0 694 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms